BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044166
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    45   3e-08
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    42   3e-07
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    42   4e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    39   1e-06
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              41   3e-06

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 25/64 (39%), Positives = 32/64 (50%)
 Frame = +3

Query: 3   RNTMLHCDGTNSRFFHMSTVVRRNRIAIKKIGDTTGN*VEGRDQISNTIVEHFQNLFTYS 182
           R+  +     NS+FFH  T  RR R  I  + D  G      D I N  V +FQNLFT +
Sbjct: 125 RSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTA 184

Query: 183 NPNI 194
           NP +
Sbjct: 185 NPQV 188



 Score = 38.1 bits (87), Expect(2) = 3e-08
 Identities = 22/48 (45%), Positives = 27/48 (56%)
 Frame = +2

Query: 206 LNIIEAAITDAENLDLTWAITIGEI*DALFSMDPHKAPGPYGFTPLFY 349
           L  ++  ITD  N  LT   T  E+  ALF + P KAPGP G T LF+
Sbjct: 193 LGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALFF 240


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +2

Query: 200 RRLNIIEAAITDAENLDLTWAITIGEI*DALFSMDPHKAPGPYGFTPLFY 349
           R  ++I+  +TDA N +L   ++  EI +ALF + P KAPGP GF   FY
Sbjct: 486 RVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFY 535



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +3

Query: 33  NSRFFHMSTVVRRNRIAIKKIGDTTGN*VEGRDQISNTIVEHFQNLFTYSNPNIHVADLT 212
           N+RFFH   V R  +  I K+ D+ G       ++ +   E+FQ LFT ++P+I  + +T
Sbjct: 430 NTRFFHSKAVWRAKKNKITKLRDSDGTVHNTTKELESMATEYFQRLFT-ADPSIDHSRVT 488

Query: 213 *LRLP 227
            L  P
Sbjct: 489 SLIKP 493


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 42.0 bits (97), Expect(2) = 4e-07
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +2

Query: 200 RRLNIIEAAITDAENLDLTWAITIGEI*DALFSMDPHKAPGPYGFTPLFY 349
           R  ++I+  +TDA N +L   ++  EI +ALF + P KAPGP GF   FY
Sbjct: 486 RVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFY 535



 Score = 37.0 bits (84), Expect(2) = 4e-07
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +3

Query: 33  NSRFFHMSTVVRRNRIAIKKIGDTTGN*VEGRDQISNTIVEHFQNLFTYSNPNIHVADLT 212
           N+RFFH   V R  +  I K+ D+ G       ++ +   E+FQ LFT ++P+I  + +T
Sbjct: 430 NTRFFHSKAVWRAKKNKITKLRDSDGTVHSTTKELESMATEYFQRLFT-ADPSIDHSRVT 488

Query: 213 *LRLP 227
            L  P
Sbjct: 489 SLIKP 493


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 33  NSRFFHMSTVVRRNRIAIKKIGDTTGN*VEGRDQISNTIVEHFQNLFTYSNPN 191
           N+++FH     R+ R  +K + D  G   E  D I N    +F ++FT SNP+
Sbjct: 353 NTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPS 405



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 20/48 (41%), Positives = 27/48 (56%)
 Frame = +2

Query: 206 LNIIEAAITDAENLDLTWAITIGEI*DALFSMDPHKAPGPYGFTPLFY 349
           +++IE  +T+  NL L    +  EI  AL  M P KAPGP G   +FY
Sbjct: 413 MSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFY 460


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 23/48 (47%), Positives = 28/48 (58%)
 Frame = +2

Query: 206 LNIIEAAITDAENLDLTWAITIGEI*DALFSMDPHKAPGPYGFTPLFY 349
           L+ ++  ITD  N  LT   T  E+  ALF M P KAPGP G T LF+
Sbjct: 259 LSEVKTLITDQINDFLTTPATEDEVRAALFLMHPEKAPGPDGMTALFF 306



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +3

Query: 3   RNTMLHCDGTNSRFFHMSTVVRRNRIAIKKIGDTTGN*VEGRDQISNTIVEHFQNLFTYS 182
           R+  +     NS++FH  T  RR R  I  + D  G        + +  V +F+ LF  S
Sbjct: 191 RSLWMKVGDNNSKYFHALTKQRRARNRIIGLHDENGKWFAEDKDVQHIAVSYFETLFNKS 250

Query: 183 NP 188
           NP
Sbjct: 251 NP 252