BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044140
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    59   3e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    59   1e-12
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    51   8e-12
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    49   3e-09
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    44   3e-09

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 58.9 bits (141), Expect(2) = 3e-13
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 158 KGNCIYFTDDFYEDYMDENDDPHDMGIFHFEDGSFEPHYPMKGKTIFPPPIW 3
           KGNCIY+TDD+ ED  D      D+GIF+ EDGS EP      +  +PPP+W
Sbjct: 332 KGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLW 383



 Score = 40.8 bits (94), Expect(2) = 3e-13
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = -2

Query: 283 YCTDGFEVFKLDLLTRNWTEVKSLPGQTLFLGDNSSMSLSS 161
           Y T  F+V +LDL    W  V SL  + LFLG+N S+SLSS
Sbjct: 285 YRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSS 325


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 26/52 (50%), Positives = 33/52 (63%)
 Frame = -1

Query: 158 KGNCIYFTDDFYEDYMDENDDPHDMGIFHFEDGSFEPHYPMKGKTIFPPPIW 3
           KGNCIY+TDD+ ED  D      D+GIF+ EDGS EP      +  +PPP+W
Sbjct: 332 KGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLW 383



 Score = 38.5 bits (88), Expect(2) = 1e-12
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = -2

Query: 283 YCTDGFEVFKLDLLTRNWTEVKSLPGQTLFLGDNSSMSLSS 161
           Y T  F+V +LD     W  V SL  + LFLG+N S+SLSS
Sbjct: 285 YRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSS 325


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 51.2 bits (121), Expect(2) = 8e-12
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
 Frame = -1

Query: 155 GNCIYFTDDFYEDYMDENDDPHDMGIFHFEDGSFE--PHYPMK--GKTIFPPPIW 3
           G+CIY+TDD+  +  D +   HD+GIF   DGS E  P YP     +  +PPP+W
Sbjct: 333 GDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLW 387



 Score = 43.5 bits (101), Expect(2) = 8e-12
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = -2

Query: 283 YCTDGFEVFKLDLLTRNWTEVKSLPGQTLFLGDNSSMSLSS 161
           Y T  FEVFKLDL    W  V SL    LF+G+NSS++LS+
Sbjct: 285 YKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSA 325


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 48.5 bits (114), Expect(2) = 3e-09
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 22/74 (29%)
 Frame = -1

Query: 158 KGNCIYFTDDFYEDYMDENDDPHDMGIFHFEDGSFE----PHYPMKGKT----------- 24
           KGNCIYFTDD+     D   + HD GI+  EDG+      P YP+K  +           
Sbjct: 324 KGNCIYFTDDYIRLCKDYVWEGHDYGIYDIEDGNIRSLGLPSYPIKHPSFTGIFYFEHSL 383

Query: 23  -------IFPPPIW 3
                  I PPP+W
Sbjct: 384 FRNTSFFILPPPVW 397



 Score = 37.4 bits (85), Expect(2) = 3e-09
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = -2

Query: 292 DGSYCTDGFEVFKLDLLTRNWTEVKSLPGQTLFLGDNSSMSLSS 161
           D  Y T+ FE++KLD     W + +SL  + LFLG N S+S+S+
Sbjct: 276 DYEYKTERFEIYKLD--DGGWKKKESLGDKMLFLGGNGSLSISA 317


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 43.9 bits (102), Expect(2) = 3e-09
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
 Frame = -1

Query: 158 KGNCIYFTDDFYEDYMDEN------DD----PHDMGIFHFEDGSFEP--HYPMKGKTIFP 15
           KGNCI+F D+F+    DEN      DD      D+G+F  E G   P  +YP   K  +P
Sbjct: 272 KGNCIFFVDNFFYS-RDENLRANGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWP 330

Query: 14  PPIW 3
           PP W
Sbjct: 331 PPHW 334



 Score = 42.0 bits (97), Expect(2) = 3e-09
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -2

Query: 268 FEVFKLDLLTRNWTEVKSLPGQTLFLGDNSSMSLS 164
           F+VFKLD   + W EVKSL  + LFLGD+S+ S S
Sbjct: 230 FKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSAS 264