BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044091
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              149   2e-34
emb|CBI24015.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/91 (75%), Positives = 81/91 (89%)
 Frame = +2

Query: 2   GRAGFLEEALELVRAMPMAPNVVVLGSLLHACQVHKDTKLSEQVSKQLLELDPHDGGNYV 181
           GRAG+L+EALEL+RAMPM PN +VLGSLL ACQ+HKDTKL EQV++QLLELDP DGGNYV
Sbjct: 353 GRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYV 412

Query: 182 FLSNFYASVNRWHDVEICRKLMVEKGVQKTP 274
           FLSN YAS++RW DV  CRKLM+++GV KTP
Sbjct: 413 FLSNLYASLSRWDDVNTCRKLMIKRGVHKTP 443


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/91 (75%), Positives = 81/91 (89%)
 Frame = +2

Query: 2   GRAGFLEEALELVRAMPMAPNVVVLGSLLHACQVHKDTKLSEQVSKQLLELDPHDGGNYV 181
           GRAG+L+EALEL+RAMPM PN +VLGSLL ACQ+HKDTKL EQV++QLLELDP DGGNYV
Sbjct: 281 GRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYV 340

Query: 182 FLSNFYASVNRWHDVEICRKLMVEKGVQKTP 274
           FLSN YAS++RW DV  CRKLM+++GV KTP
Sbjct: 341 FLSNLYASLSRWDDVNTCRKLMIKRGVHKTP 371


>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   GRAGFLEEALELVRAMPMAPNVVVLGSLLHACQVHKDTKLSEQVSKQLLELDPHDGGNYV 181
           GRAG LEEA +L+  MP+ P+  VLG+L+ AC++H +T+L EQ+ K+++EL+PH+ G YV
Sbjct: 345 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 404

Query: 182 FLSNFYASVNRWHDVEICRKLMVEKGVQKTP 274
            L+N YAS  RW DV   RKLM ++GV+K P
Sbjct: 405 LLANLYASAGRWEDVAKVRKLMNDRGVKKAP 435


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   GRAGFLEEALELVRAMPMAPNVVVLGSLLHACQVHKDTKLSEQVSKQLLELDPHDGGNYV 181
           GRAG LEEA +L+  MP+ P+  VLG+L+ AC++H +T+L EQ+ K+++EL+PH+ G YV
Sbjct: 400 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 459

Query: 182 FLSNFYASVNRWHDVEICRKLMVEKGVQKTP 274
            L+N YAS  RW DV   RKLM ++GV+K P
Sbjct: 460 LLANLYASAGRWEDVAKVRKLMNDRGVKKAP 490


>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/89 (58%), Positives = 63/89 (70%)
 Frame = +2

Query: 2   GRAGFLEEALELVRAMPMAPNVVVLGSLLHACQVHKDTKLSEQVSKQLLELDPHDGGNYV 181
           GRA  L EALELV AMP+APNV++ GSL+ AC+VH + +L E  +K+LLELDP   G +V
Sbjct: 503 GRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHV 562

Query: 182 FLSNFYASVNRWHDVEICRKLMVEKGVQK 268
           FLSN YA   RW DV   RKLM  KG+ K
Sbjct: 563 FLSNIYAKARRWEDVGQVRKLMKHKGISK 591