BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044076
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ98537.1| PPR motif protein [Malus x domestica]                   78   9e-13
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...    72   6e-11
gb|ADE77588.1| unknown [Picea sitchensis]                              71   1e-10
emb|CBI28135.3| unnamed protein product [Vitis vinifera]               71   1e-10

>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/57 (64%), Positives = 47/57 (82%)
 Frame = -2

Query: 285 DDVQKLRNVMKEKGMRKTPGSSEIQVGTELHVFVAGDRSHPQTSVIYETLALLQREM 115
           D+V+K+R +MKE+G+RK PG S IQVG EL+VFVAGD+SHP+T  IY TLALL  E+
Sbjct: 692 DEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTLALLLMEI 748


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/57 (64%), Positives = 42/57 (73%)
 Frame = -2

Query: 285 DDVQKLRNVMKEKGMRKTPGSSEIQVGTELHVFVAGDRSHPQTSVIYETLALLQREM 115
           D V  LR +MKEKG+RK PG S I+VG ELHVF+A DRSHP+T  IY TL LL  EM
Sbjct: 748 DKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/61 (54%), Positives = 45/61 (73%)
 Frame = -2

Query: 282 DVQKLRNVMKEKGMRKTPGSSEIQVGTELHVFVAGDRSHPQTSVIYETLALLQREMRSLN 103
           DV KLR +MKE+G++K PG S I+V  E+H FVAGD+SHP+T  IY  L  L ++++SL 
Sbjct: 669 DVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLG 728

Query: 102 Y 100
           Y
Sbjct: 729 Y 729


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)
 Frame = -2

Query: 285 DDVQKLRNVMKEKGMRKTPGSSEIQVGTELHVFVAGDRSHPQTSVIYETLALLQREMRSL 106
           DDV K+R +MKEK ++K+PG S I+V  +LH FV GD SHPQT  IY  L  L R+M ++
Sbjct: 160 DDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAV 219

Query: 105 NY 100
            Y
Sbjct: 220 GY 221


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -2

Query: 282  DVQKLRNVMKEKGMRKTPGSSEIQVGTELHVFVAGDRSHPQTSVIYETLALLQREMRSLN 103
            +V  +R++MK +G+RK PG S IQ G +L+VFVAGD SHP+T  IY  LA+L  EMR + 
Sbjct: 1871 EVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMG 1930

Query: 102  YFHMLNN 82
            Y  + +N
Sbjct: 1931 YVPIASN 1937