BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044062
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [S...   134   1e-29
tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea m...   126   2e-27
ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
emb|CBI31086.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi...   117   8e-25

>ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [Sorghum bicolor]
           gi|241930143|gb|EES03288.1| hypothetical protein
           SORBIDRAFT_03g028130 [Sorghum bicolor]
          Length = 694

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/110 (60%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
 Frame = -2

Query: 348 LLNGCRIHGNVPLAEVAARHLIELKPQHSGYHVLLSNIYRDASRQDDVTRVRTIMKDMGV 169
           LL+ CRIHGN+ LAE+AA+ LIEL PQHSGY +LL +IY  + R +DV+++RT M+D G+
Sbjct: 575 LLSSCRIHGNIGLAEIAAKKLIELDPQHSGYWMLLKDIYAKSMRWNDVSQLRTAMRDKGI 634

Query: 168 IKSPGYSWIEV-SGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRP 22
            K PGYSWIEV   E H FLTADK H QS  IY  L GLT+ L+ EGY P
Sbjct: 635 KKCPGYSWIEVGDSEVHRFLTADKLHTQSHQIYRVLGGLTQQLMDEGYEP 684


>tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea mays]
          Length = 696

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/108 (58%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
 Frame = -2

Query: 348 LLNGCRIHGNVPLAEVAARHLIELKPQHSGYHVLLSNIYRDASRQDDVTRVRTIMKDMGV 169
           LL+ CRIHGN+ LAE+AA+ L+EL PQHSGY +LL ++Y  A R +DV+++R  M+D GV
Sbjct: 579 LLSSCRIHGNIGLAEIAAKKLVELDPQHSGYWMLLKDMYSKAKRWNDVSQLRAAMRDNGV 638

Query: 168 IKSPGYSWIE-VSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGY 28
            K PGYSWIE    E H FLTADK H QS  IY  L GLT+ L+ EGY
Sbjct: 639 KKCPGYSWIEGRDSEVHRFLTADKLHSQSHQIYEVLGGLTEQLMDEGY 686


>ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Glycine max]
          Length = 813

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/109 (52%), Positives = 75/109 (68%)
 Frame = -2

Query: 348  LLNGCRIHGNVPLAEVAARHLIELKPQHSGYHVLLSNIYRDASRQDDVTRVRTIMKDMGV 169
            LL  CR+HGNV LA++A+RHL+EL P++SGY+VLLSN++ DA     V +VR++MK+ GV
Sbjct: 691  LLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGV 750

Query: 168  IKSPGYSWIEVSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRP 22
             K PGYSWI+V+G  H F  AD  H +S  IY  L  L   L  +GY P
Sbjct: 751  QKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVP 799


>emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/111 (51%), Positives = 78/111 (70%)
 Frame = -2

Query: 348 LLNGCRIHGNVPLAEVAARHLIELKPQHSGYHVLLSNIYRDASRQDDVTRVRTIMKDMGV 169
           LL  CR+HGNV LAEVA+R+L +L PQ+SGY+VLLSN++ +A + + V ++R++MK+ GV
Sbjct: 627 LLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 686

Query: 168 IKSPGYSWIEVSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRPCL 16
            K PG SWI+V+   H F+ AD++H QS  IY  L  L   L  EGY P L
Sbjct: 687 QKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQL 737


>ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Vitis vinifera]
          Length = 853

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/111 (51%), Positives = 78/111 (70%)
 Frame = -2

Query: 348  LLNGCRIHGNVPLAEVAARHLIELKPQHSGYHVLLSNIYRDASRQDDVTRVRTIMKDMGV 169
            LL  CR+HGNV LAEVA+R+L +L PQ+SGY+VLLSN++ +A + + V ++R++MK+ GV
Sbjct: 726  LLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 785

Query: 168  IKSPGYSWIEVSGEFHNFLTADKTHKQSPTIYCTLDGLTKHLIAEGYRPCL 16
             K PG SWI+V+   H F+ AD++H QS  IY  L  L   L  EGY P L
Sbjct: 786  QKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQL 836