BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044042
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578534.1| PREDICTED: SKP1-like protein 4-like [Brachyp...    58   9e-07
dbj|BAB85603.1| kinetochore protein [Brassica juncea]                  55   5e-06
ref|XP_002313704.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_003578534.1| PREDICTED: SKP1-like protein 4-like [Brachypodium distachyon]
          Length = 171

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/40 (60%), Positives = 35/40 (87%)
 Frame = -3

Query: 272 ELVLAAHYLDIKNLMDLTSQAIADSVRHKSPDEISQIFNV 153
           EL+LAA+YLDIK L+DLT QA+AD ++ K+P+EI ++FN+
Sbjct: 111 ELILAANYLDIKGLLDLTCQAVADIIKEKTPEEIRKVFNI 150


>dbj|BAB85603.1| kinetochore protein [Brassica juncea]
          Length = 161

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = -3

Query: 272 ELVLAAHYLDIKNLMDLTSQAIADSVRHKSPDEISQIFNV 153
           EL+LAA+YL+IKNL+DLT Q +AD ++ K+PDEI   FN+
Sbjct: 101 ELILAANYLNIKNLLDLTCQTVADMIKGKTPDEIRTTFNI 140


>ref|XP_002313704.1| predicted protein [Populus trichocarpa] gi|222850112|gb|EEE87659.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/40 (60%), Positives = 35/40 (87%)
 Frame = -3

Query: 272 ELVLAAHYLDIKNLMDLTSQAIADSVRHKSPDEISQIFNV 153
           +L+LAA+YL+IK+L+DLT QA AD ++ K+PDEI +IFN+
Sbjct: 98  DLILAANYLNIKDLLDLTCQAAADMIKGKTPDEIRKIFNI 137