BLASTX nr result

ID: Coptis25_contig00044040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044040
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320887.1| cytochrome P450 [Populus trichocarpa] gi|222...    86   3e-15
ref|XP_002518911.1| cytochrome P450, putative [Ricinus communis]...    86   4e-15
ref|XP_002301423.1| cytochrome P450 [Populus trichocarpa] gi|118...    86   4e-15
ref|XP_002304580.1| cytochrome P450 [Populus trichocarpa] gi|118...    85   5e-15
ref|XP_003627517.1| Cytochrome P450 78A3 [Medicago truncatula] g...    84   1e-14

>ref|XP_002320887.1| cytochrome P450 [Populus trichocarpa] gi|222861660|gb|EEE99202.1|
           cytochrome P450 [Populus trichocarpa]
          Length = 535

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -2

Query: 282 METVIDSIWVFALFSKCCNMSSENXXXXXXXXXXXXXXXXXLYWAYPGGTAWGKFYC-TT 106
           M T IDS W+FAL SKC   + EN                 +YWAYPGG AWGK+    T
Sbjct: 1   MRTDIDSFWIFALASKCRAFTQENIAWSLLIIGLAWIVVTLIYWAYPGGPAWGKYKLKNT 60

Query: 105 SKSKSIPIPGPRGLPLFGSMNLMASRLSHHLLA 7
           S + S PIPGPRG P+ GSM LM S L+HH +A
Sbjct: 61  SLTISNPIPGPRGFPITGSMKLMTS-LAHHKIA 92


>ref|XP_002518911.1| cytochrome P450, putative [Ricinus communis]
           gi|223541898|gb|EEF43444.1| cytochrome P450, putative
           [Ricinus communis]
          Length = 531

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/93 (49%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = -2

Query: 282 METVIDSIWVFALFSKCCNMSSENXXXXXXXXXXXXXXXXXLYWAYPGGTAWGKFYCTTS 103
           M T IDS+WV ALFSKC  +SS+N                  YWA+PGG AWGK++    
Sbjct: 1   MGTQIDSLWVIALFSKCRAISSQNTAFLLFFLCMASLAMALCYWAHPGGHAWGKYFFKRG 60

Query: 102 -KSKSIPIPGPRGLPLFGSMNLMASRLSHHLLA 7
            KSKSIP  GPRG+P+ GSM+LM + L+HH +A
Sbjct: 61  CKSKSIP--GPRGIPILGSMSLM-TNLAHHKIA 90


>ref|XP_002301423.1| cytochrome P450 [Populus trichocarpa] gi|118486154|gb|ABK94920.1|
           unknown [Populus trichocarpa]
           gi|222843149|gb|EEE80696.1| cytochrome P450 [Populus
           trichocarpa]
          Length = 544

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -2

Query: 282 METVIDSIWVFALFSKCCNMSSENXXXXXXXXXXXXXXXXXLYWAYPGGTAWGKFYC-TT 106
           M T ID+ W+FAL SKC   + EN                 +YWAYPGG AWGK+    T
Sbjct: 1   MRTDIDNFWIFALASKCRVFTQENIAWSLLIMGLAWIATTLIYWAYPGGPAWGKYKLKNT 60

Query: 105 SKSKSIPIPGPRGLPLFGSMNLMASRLSHHLLA 7
           S + S PIPGPRGLPL G M LM S L+HH +A
Sbjct: 61  SFTISKPIPGPRGLPLIGGMRLMTS-LAHHKIA 92


>ref|XP_002304580.1| cytochrome P450 [Populus trichocarpa] gi|118481996|gb|ABK92929.1|
           unknown [Populus trichocarpa]
           gi|222842012|gb|EEE79559.1| cytochrome P450 [Populus
           trichocarpa]
          Length = 531

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/95 (49%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = -2

Query: 282 METVIDSIWVFALFSKCCNMSSENXXXXXXXXXXXXXXXXXLYWAYPGGTAWGKFY---C 112
           MET IDS WV AL SKC   SS++                  YW YPGG AWGK++    
Sbjct: 1   METQIDSFWVLALVSKCKAFSSQDPIFLLLSLFLAWLAIALCYWVYPGGPAWGKYWLKRA 60

Query: 111 TTSKSKSIPIPGPRGLPLFGSMNLMASRLSHHLLA 7
           T SK+K IP  GPRG P+ GSMNLM + L+HH LA
Sbjct: 61  TCSKAKMIP--GPRGFPVIGSMNLMVN-LAHHKLA 92


>ref|XP_003627517.1| Cytochrome P450 78A3 [Medicago truncatula]
           gi|84514161|gb|ABC59089.1| cytochrome P450 monooxygenase
           CYP78A29 [Medicago truncatula]
           gi|355521539|gb|AET01993.1| Cytochrome P450 78A3
           [Medicago truncatula]
          Length = 546

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 21/113 (18%)
 Frame = -2

Query: 282 METVIDSIWVFALFSKCCNMSSENXXXXXXXXXXXXXXXXXLYWAYPGGTAWGKFYCT-- 109
           M T ID++W+FAL SKC   + EN                  YW++PGG AWGK+Y +  
Sbjct: 1   MSTNIDNLWIFALASKC---TQENIAYSLLIMALLWITMTFFYWSHPGGPAWGKYYYSSN 57

Query: 108 -------------------TSKSKSIPIPGPRGLPLFGSMNLMASRLSHHLLA 7
                              T+ S SI IPGP+G PLFGSMNLM+S L+HH +A
Sbjct: 58  YSTTKTNNKNNLNSSTKPSTTTSSSIFIPGPKGYPLFGSMNLMSSSLAHHRIA 110


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