BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044031
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   163   1e-38
gb|AFW61007.1| hypothetical protein ZEAMMB73_735189, partial [Ze...   155   2e-36
gb|AFW61006.1| hypothetical protein ZEAMMB73_735189 [Zea mays]        155   2e-36
ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medic...   151   5e-35

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/113 (65%), Positives = 91/113 (80%)
 Frame = -2

Query: 343  AKLKSNLKNHSKFLNLMMRTDPECVAPMIISGHRFTLIEQHQVAASKYLEAYKLQPDNPL 164
            ++L++    HSK L+ M     +CV P++I GH+FT+I QHQ+AA +YLEAYKL P+NPL
Sbjct: 725  SRLENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLMPENPL 784

Query: 163  INLCVGTALVNLALGLSVQNKHQCIAQAFAFLYNNLRLCHNSQEALYNIARAY 5
            INLC GTAL+N+ALG  +QNKHQC+AQ  AFLYNNLRLC NSQEALYNIARAY
Sbjct: 785  INLCAGTALINIALGFRLQNKHQCLAQGLAFLYNNLRLCENSQEALYNIARAY 837


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/113 (65%), Positives = 91/113 (80%)
 Frame = -2

Query: 343  AKLKSNLKNHSKFLNLMMRTDPECVAPMIISGHRFTLIEQHQVAASKYLEAYKLQPDNPL 164
            ++L++    HSK L+ M     +CV P++I GH+FT+I QHQ+AA +YLEAYKL P+NPL
Sbjct: 920  SRLENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLMPENPL 979

Query: 163  INLCVGTALVNLALGLSVQNKHQCIAQAFAFLYNNLRLCHNSQEALYNIARAY 5
            INLC GTAL+N+ALG  +QNKHQC+AQ  AFLYNNLRLC NSQEALYNIARAY
Sbjct: 980  INLCAGTALINIALGFRLQNKHQCLAQGLAFLYNNLRLCENSQEALYNIARAY 1032


>gb|AFW61007.1| hypothetical protein ZEAMMB73_735189, partial [Zea mays]
          Length = 290

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/113 (65%), Positives = 88/113 (77%)
 Frame = -2

Query: 343 AKLKSNLKNHSKFLNLMMRTDPECVAPMIISGHRFTLIEQHQVAASKYLEAYKLQPDNPL 164
           ++++    +H K+L      +P+CV P+IISGHRFT I QHQ AA  YLEAYKL P+NPL
Sbjct: 99  SRIEDRFPHHFKYLLRTREANPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLDPENPL 158

Query: 163 INLCVGTALVNLALGLSVQNKHQCIAQAFAFLYNNLRLCHNSQEALYNIARAY 5
           INLCVGTAL++LALG  +QNK+QCI QAFAFLY  LRLC NSQEA YNIARAY
Sbjct: 159 INLCVGTALISLALGFRLQNKNQCIVQAFAFLYRYLRLCDNSQEASYNIARAY 211


>gb|AFW61006.1| hypothetical protein ZEAMMB73_735189 [Zea mays]
          Length = 676

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/113 (65%), Positives = 88/113 (77%)
 Frame = -2

Query: 343 AKLKSNLKNHSKFLNLMMRTDPECVAPMIISGHRFTLIEQHQVAASKYLEAYKLQPDNPL 164
           ++++    +H K+L      +P+CV P+IISGHRFT I QHQ AA  YLEAYKL P+NPL
Sbjct: 485 SRIEDRFPHHFKYLLRTREANPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLDPENPL 544

Query: 163 INLCVGTALVNLALGLSVQNKHQCIAQAFAFLYNNLRLCHNSQEALYNIARAY 5
           INLCVGTAL++LALG  +QNK+QCI QAFAFLY  LRLC NSQEA YNIARAY
Sbjct: 545 INLCVGTALISLALGFRLQNKNQCIVQAFAFLYRYLRLCDNSQEASYNIARAY 597


>ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
            gi|355508598|gb|AES89740.1| Transcription factor tau
            subunit sfc4 [Medicago truncatula]
          Length = 937

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/116 (64%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
 Frame = -2

Query: 340  KLKSNLKN----HSKFLNLMMRTDPECVAPMIISGHRFTLIEQHQVAASKYLEAYKLQPD 173
            K+ S L+N    H KFL  M     +CV P++IS H+FTL   HQ AA KYLEAYKL P+
Sbjct: 744  KVVSRLENRDTRHDKFLRSMQGKFVDCVPPILISAHQFTLCSHHQDAARKYLEAYKLLPE 803

Query: 172  NPLINLCVGTALVNLALGLSVQNKHQCIAQAFAFLYNNLRLCHNSQEALYNIARAY 5
            NPL+NLCVGTALVNLALG  + NKHQCI Q  AFLYNNL +C NSQE+LYNIARAY
Sbjct: 804  NPLVNLCVGTALVNLALGFRLHNKHQCIVQGLAFLYNNLEICTNSQESLYNIARAY 859