BLASTX nr result

ID: Coptis25_contig00044021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044021
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003384917.1| PREDICTED: protein RIC1 homolog [Amphimedon ...    84   1e-14
ref|XP_003620173.1| hypothetical protein MTR_6g078110 [Medicago ...    72   5e-11
ref|XP_003610646.1| hypothetical protein MTR_5g005410 [Medicago ...    66   3e-09
ref|XP_003622478.1| hypothetical protein MTR_7g038190 [Medicago ...    55   4e-06

>ref|XP_003384917.1| PREDICTED: protein RIC1 homolog [Amphimedon queenslandica]
          Length = 2244

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
 Frame = -2

Query: 382 LELQVWYLDDGIVIGDIEQVARAMSIIKEEGPPLGLVLNVTKTEIFQPS-LDHRHSNLDL 206
           L L  WYLDDGI+ G    +  A++II++ GPP GL LN +K+ +F PS +D   S+L  
Sbjct: 61  LLLNAWYLDDGILTGPPADLLSALNIIEDMGPPCGLHLNHSKSLLFLPSGVDSSQSSL-- 118

Query: 205 FSSDVSRPQQGVRLFGGAVGTDVSFTCGLVSRRVEKTLRLMSLLSQLKDPQCELALLRAC 26
             SD+     G  L G  +G    F C  +S+R++K    + LLS L+D Q E +LLR+C
Sbjct: 119 -PSDIPVTSLGFVLLGSPIGPP-EFCCESISKRLDKAKESVKLLSLLEDSQFEYSLLRSC 176

Query: 25  SGLAKL 8
             L K+
Sbjct: 177 LSLQKI 182


>ref|XP_003620173.1| hypothetical protein MTR_6g078110 [Medicago truncatula]
           gi|355495188|gb|AES76391.1| hypothetical protein
           MTR_6g078110 [Medicago truncatula]
          Length = 265

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = -2

Query: 388 CQLELQVWYLDDGIVIGDIEQVARAMSIIKEEGPPLGLVLNVTKTEIFQPSLD-HRHSNL 212
           C+L L  WYL+D  +IGD E+VA+++ II+   P LGL LN+ KTEIF PS D ++H  +
Sbjct: 47  CKLLLHAWYLNDETLIGDSEKVAKSLDIIRVSRPELGLELNIRKTEIFLPSCDGNKHPGI 106

Query: 211 DLFSSDVSRPQQGVRLFGGAVGTDVSFTCGLVSRRVEK 98
             F   +     GV+L G  V  D  F  GL  +R  K
Sbjct: 107 FSFWI-LGGGTLGVKLLGRVVSRDTCFIEGLAMKRTLK 143


>ref|XP_003610646.1| hypothetical protein MTR_5g005410 [Medicago truncatula]
           gi|355511981|gb|AES93604.1| hypothetical protein
           MTR_5g005410 [Medicago truncatula]
          Length = 389

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = -2

Query: 208 LFSSDVSRPQQGVRLFGGAVGTDVSFTCGLVSRRVEKTLRLMSLLSQLKDPQCELALLRA 29
           LF  D+ RP  GV+L GG V  D  F  GL  +R  + + LM LL +L+DPQ E+ LLR+
Sbjct: 69  LFPVDIRRPTLGVKLLGGVVSRDKGFIEGLAIKRASRVVELMHLLPRLRDPQREIFLLRS 128

Query: 28  CSGLAKL 8
           C G+ KL
Sbjct: 129 CMGITKL 135


>ref|XP_003622478.1| hypothetical protein MTR_7g038190 [Medicago truncatula]
           gi|355497493|gb|AES78696.1| hypothetical protein
           MTR_7g038190 [Medicago truncatula]
          Length = 186

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 40/126 (31%), Positives = 54/126 (42%)
 Frame = -2

Query: 388 CQLELQVWYLDDGIVIGDIEQVARAMSIIKEEGPPLGLVLNVTKTEIFQPSLDHRHSNLD 209
           C+L L   YLD    + D E+V +A+ II+                      D R+   D
Sbjct: 32  CKLFLHARYLDAENFVWDSEEVVKALDIIR----------------------DSRYWEAD 69

Query: 208 LFSSDVSRPQQGVRLFGGAVGTDVSFTCGLVSRRVEKTLRLMSLLSQLKDPQCELALLRA 29
                      GV+ FGGAV  D  F  GL+  R  +   L+    QL+D Q EL LLR+
Sbjct: 70  ----------GGVKFFGGAVNRDKGFIEGLIMNRASRVAELLHPFPQLQDHQSELLLLRS 119

Query: 28  CSGLAK 11
           C  +AK
Sbjct: 120 CMDIAK 125


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