BLASTX nr result

ID: Coptis25_contig00044007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044007
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09619.1| mutator-like transposase-like protein [Arabidops...    64   1e-08
gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570]             62   4e-08
ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea ma...    62   4e-08
ref|XP_003554740.1| PREDICTED: uncharacterized protein LOC100778...    62   5e-08
ref|XP_003568432.1| PREDICTED: uncharacterized protein LOC100828...    62   6e-08

>dbj|BAB09619.1| mutator-like transposase-like protein [Arabidopsis thaliana]
           gi|16648945|gb|AAL24324.1| mutator-like transposase-like
           protein [Arabidopsis thaliana]
           gi|20259876|gb|AAM13285.1| mutator-like transposase-like
           protein [Arabidopsis thaliana]
          Length = 597

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/126 (29%), Positives = 58/126 (46%)
 Frame = -3

Query: 412 EECPWMACFRKKPSEFTMKLRKIVPEHTCYADPLEHNCMADANFIVEELEDQITLHHKTF 233
           E CPW     K P   T  +R +  EHTC      H+  A   ++   +E +I   +  +
Sbjct: 69  EGCPWRIHAAKCPGVQTFTVRTLNSEHTCEGVRDLHHQQASVGWVARSVEARIR-DNPQY 127

Query: 232 KPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFGDYDGSYRMIPELRKQILLSNLGLIA 53
           KP +I + +     + V+Y  AW  + + +  L G Y+  YR +P   +QI L N G  A
Sbjct: 128 KPKEILQDIRDEHGVAVSYMQAWRGKERSMAALHGTYEEGYRFLPAYCEQIKLVNPGSFA 187

Query: 52  TYSGYG 35
           + S  G
Sbjct: 188 SVSALG 193


>gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570]
          Length = 594

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/126 (26%), Positives = 59/126 (46%)
 Frame = -3

Query: 412 EECPWMACFRKKPSEFTMKLRKIVPEHTCYADPLEHNCMADANFIVEELEDQITLHHKTF 233
           E CPW     K P   T  +R +  EH C      H+  A   ++   +E ++   +   
Sbjct: 65  EGCPWRVHIAKCPGVPTFTVRTLHGEHKCEGVLNLHHQQATVGWVARSVEARLR-DNPQI 123

Query: 232 KPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFGDYDGSYRMIPELRKQILLSNLGLIA 53
           KP +I + +     + V+Y  AW  + + +  + G  +  YR++P   +QI+ +N G +A
Sbjct: 124 KPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNGTLEDGYRLLPAYCEQIVKTNPGSVA 183

Query: 52  TYSGYG 35
           TY G G
Sbjct: 184 TYRGIG 189


>ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea mays]
           gi|219886411|gb|ACL53580.1| unknown [Zea mays]
          Length = 594

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/126 (26%), Positives = 59/126 (46%)
 Frame = -3

Query: 412 EECPWMACFRKKPSEFTMKLRKIVPEHTCYADPLEHNCMADANFIVEELEDQITLHHKTF 233
           E CPW     K P   T  +R +  EH C      H+  A   ++   +E ++   +   
Sbjct: 65  EGCPWRVHIAKCPGVPTFTVRTLHGEHKCEGVLNLHHQQATVGWVARSVEARLR-DNPQI 123

Query: 232 KPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFGDYDGSYRMIPELRKQILLSNLGLIA 53
           KP +I + +     + V+Y  AW  + + +  + G  +  YR++P   +QI+ +N G +A
Sbjct: 124 KPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNGTLEDGYRLLPAYCEQIVKTNPGSVA 183

Query: 52  TYSGYG 35
           TY G G
Sbjct: 184 TYRGIG 189


>ref|XP_003554740.1| PREDICTED: uncharacterized protein LOC100778655 [Glycine max]
          Length = 599

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/127 (28%), Positives = 60/127 (47%)
 Frame = -3

Query: 412 EECPWMACFRKKPSEFTMKLRKIVPEHTCYADPLEHNCMADANFIVEELEDQITLHHKTF 233
           E CPW     K P   T  +R +  EHTC      H+  A   ++   +E +I   +  +
Sbjct: 68  EGCPWRVHVAKCPGVPTFTVRTLHGEHTCEGVQNLHHQQASVGWVARSVEARIR-DNPQY 126

Query: 232 KPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFGDYDGSYRMIPELRKQILLSNLGLIA 53
           KP +I + +     I V+Y  AW  + + +  L G ++  YR++P   +QI  +N G IA
Sbjct: 127 KPREILQDIRDQHGIAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIA 186

Query: 52  TYSGYGK 32
           +    G+
Sbjct: 187 SVVATGQ 193


>ref|XP_003568432.1| PREDICTED: uncharacterized protein LOC100828991 [Brachypodium
           distachyon]
          Length = 592

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/126 (26%), Positives = 58/126 (46%)
 Frame = -3

Query: 412 EECPWMACFRKKPSEFTMKLRKIVPEHTCYADPLEHNCMADANFIVEELEDQITLHHKTF 233
           E CPW     K     T  +R +  EHTC      H+  A  N++   +E ++   +   
Sbjct: 65  EGCPWRVHVAKCHGVPTFTVRTLHGEHTCEGVQDLHHQQATVNWVARSVEARLR-DNPQI 123

Query: 232 KPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFGDYDGSYRMIPELRKQILLSNLGLIA 53
           KP +I + +     + V+Y  AW  + + +  + G  +  YR +P   +QI+ +N G +A
Sbjct: 124 KPKEILQDIRDQHGVAVSYMQAWRGKERSMAAVHGTLEDGYRFLPSYCEQIVKTNPGSVA 183

Query: 52  TYSGYG 35
            Y G G
Sbjct: 184 VYKGSG 189


Top