BLASTX nr result

ID: Coptis25_contig00044005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044005
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...   196   1e-48
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]   196   1e-48
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
gb|ABK95014.1| unknown [Populus trichocarpa]                          173   2e-41
ref|XP_004167081.1| PREDICTED: LOW QUALITY PROTEIN: PAN domain-c...   171   7e-41

>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  196 bits (499), Expect = 1e-48
 Identities = 88/152 (57%), Positives = 113/152 (74%), Gaps = 4/152 (2%)
 Frame = +2

Query: 2   DFKAISEECELPSSCGSYGLCKPGKNCECLNNKTEYNHSSGEECFSSQTGNFCE--EKEE 175
           D++AI ++CELP SCGSYGLC+PG  C C++N TEYN  S +EC   +TGN C   E E 
Sbjct: 281 DYQAIKDQCELPGSCGSYGLCRPGSGCSCIDNSTEYN--SEKECLPPETGNLCSDIEGEN 338

Query: 176 GFWVLRRNGVDLPYKELMEFEQMDSLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQS 355
            F VLRR G++LPYKELM +E   SL+ CE SCE NCSCWGSV+NN +G+CY++DYPI++
Sbjct: 339 KFRVLRRKGIELPYKELMGYETTSSLEQCERSCENNCSCWGSVYNNASGFCYRVDYPIRT 398

Query: 356 LVSVGDENKIGYFKVRTVVEKKRH--VGYVIG 445
           L+ VGD+ K+GYFKVR   +KK     G+VIG
Sbjct: 399 LLGVGDDTKVGYFKVREGPQKKAESGFGFVIG 430


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score =  196 bits (499), Expect = 1e-48
 Identities = 88/152 (57%), Positives = 113/152 (74%), Gaps = 4/152 (2%)
 Frame = +2

Query: 2   DFKAISEECELPSSCGSYGLCKPGKNCECLNNKTEYNHSSGEECFSSQTGNFCE--EKEE 175
           D++AI ++CELP SCGSYGLC+PG  C C++N TEYN  S +EC   +TGN C   E E 
Sbjct: 281 DYQAIKDQCELPGSCGSYGLCRPGSGCSCIDNSTEYN--SEKECLPPETGNLCSDIEGEN 338

Query: 176 GFWVLRRNGVDLPYKELMEFEQMDSLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQS 355
            F VLRR G++LPYKELM +E   SL+ CE SCE NCSCWGSV+NN +G+CY++DYPI++
Sbjct: 339 KFRVLRRKGIELPYKELMGYETTSSLEQCERSCENNCSCWGSVYNNASGFCYRVDYPIRT 398

Query: 356 LVSVGDENKIGYFKVRTVVEKKRH--VGYVIG 445
           L+ VGD+ K+GYFKVR   +KK     G+VIG
Sbjct: 399 LLGVGDDTKVGYFKVREGPQKKAESGFGFVIG 430


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  173 bits (438), Expect = 2e-41
 Identities = 77/138 (55%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
 Frame = +2

Query: 2   DFKAISEECELPSSCGSYGLCKPGKNCECLNNKTEYNHSSGEECFSS--QTGNFCEEKEE 175
           D++AI+E CELPS CG YGLC+ G  C CL+N+T+ + +S + C     Q+G+FC   ++
Sbjct: 281 DYQAITETCELPSPCGPYGLCRAGSGCSCLDNRTQVDTASFQ-CIDGDDQSGDFCSGSDD 339

Query: 176 GFWVLRRNGVDLPYKELMEFEQMDS-LDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQ 352
            FWVLRR GV+LP+KELM+ +   S ++ CE SC++NCSCWG+V+NN TG+CY ++YPIQ
Sbjct: 340 -FWVLRRKGVELPFKELMDSDTTSSSVEECELSCQRNCSCWGAVYNNATGFCYPLNYPIQ 398

Query: 353 SLVSVGDENKIGYFKVRT 406
           +LV VGDE+K+GYFKVRT
Sbjct: 399 TLVGVGDESKVGYFKVRT 416


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score =  173 bits (438), Expect = 2e-41
 Identities = 77/138 (55%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
 Frame = +2

Query: 2   DFKAISEECELPSSCGSYGLCKPGKNCECLNNKTEYNHSSGEECFSS--QTGNFCEEKEE 175
           D++AI+E CELPS CG YGLC+ G  C CL+N+T+ + +S + C     Q+G+FC   ++
Sbjct: 281 DYQAITETCELPSPCGPYGLCRAGSGCSCLDNRTQVDTASFQ-CIDGDDQSGDFCSGSDD 339

Query: 176 GFWVLRRNGVDLPYKELMEFEQMDS-LDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQ 352
            FWVLRR GV+LP+KELM+ +   S ++ CE SC++NCSCWG+V+NN TG+CY ++YPIQ
Sbjct: 340 -FWVLRRKGVELPFKELMDSDTTSSSVEECELSCQRNCSCWGAVYNNATGFCYTLNYPIQ 398

Query: 353 SLVSVGDENKIGYFKVRT 406
           +LV VGDE+K+GYFKVRT
Sbjct: 399 TLVGVGDESKVGYFKVRT 416


>ref|XP_004167081.1| PREDICTED: LOW QUALITY PROTEIN: PAN domain-containing protein
           At5g03700-like [Cucumis sativus]
          Length = 645

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/150 (53%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
 Frame = +2

Query: 5   FKAISEECELPSSCGSYGLCKPGKNCECLNNKTEYNHSSGEECFSSQTGNFCEE--KEEG 178
           F+AISE+CELPS CGSYGLC+PG  C CL+N+T Y  +SG+ C  S +G+FC     +  
Sbjct: 286 FEAISEQCELPSPCGSYGLCEPGSGCSCLDNRTIY--TSGQ-CLPSDSGDFCGVGVAKSE 342

Query: 179 FWVLRRNGVDLPYKELMEFEQMDSLDACEDSCEKNCSCWGSVFNNVTGYCYKIDYPIQSL 358
           FWVLRR+GV+LP+KELM +    ++D CE  CE NCSCWGS++ N TG+CY +DYP++++
Sbjct: 343 FWVLRRSGVELPFKELMSYRTGFTMDQCESVCETNCSCWGSLYYNATGFCYLVDYPVRTV 402

Query: 359 VSVGDENKIGYFKVRTV-VEKKRHVGYVIG 445
           V+  D  K GYFKVR      K  VG  IG
Sbjct: 403 VAEADGTKTGYFKVRKAQARSKSKVGLEIG 432


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