BLASTX nr result

ID: Coptis25_contig00043998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043998
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540347.1| PREDICTED: uncharacterized protein LOC100819...   129   2e-28
ref|XP_003543352.1| PREDICTED: uncharacterized protein LOC100790...   127   9e-28
ref|XP_002272845.1| PREDICTED: uncharacterized protein LOC100261...   127   9e-28
ref|XP_002333114.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002330431.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_003540347.1| PREDICTED: uncharacterized protein LOC100819670 [Glycine max]
          Length = 69

 Score =  129 bits (324), Expect = 2e-28
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = +2

Query: 38  MVFFCFLVDQKKMVSSSKPAAGICSRCGGGASVADMKTQTRFLYVPFYWKYWRAIICTFC 217
           MVFFCFLVDQ++ V  SKPAAGICSRCGGGASVADMKT TRF YVPFYWK WRAI+CTFC
Sbjct: 1   MVFFCFLVDQQRQVQRSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKSWRAIVCTFC 60

Query: 218 GAVLKSYR 241
           GAVL+SY+
Sbjct: 61  GAVLRSYQ 68


>ref|XP_003543352.1| PREDICTED: uncharacterized protein LOC100790961 [Glycine max]
          Length = 69

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = +2

Query: 38  MVFFCFLVDQKKMVSSSKPAAGICSRCGGGASVADMKTQTRFLYVPFYWKYWRAIICTFC 217
           MVFFCFLVDQ++ V  SKPAAGICSRCGGGASVAD+KT TRF YVPFYWK WRAI+CTFC
Sbjct: 1   MVFFCFLVDQRREVQRSKPAAGICSRCGGGASVADIKTATRFCYVPFYWKSWRAIVCTFC 60

Query: 218 GAVLKSYR 241
           GAVL+SY+
Sbjct: 61  GAVLRSYQ 68


>ref|XP_002272845.1| PREDICTED: uncharacterized protein LOC100261846 [Vitis vinifera]
          Length = 68

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/68 (83%), Positives = 61/68 (89%)
 Frame = +2

Query: 38  MVFFCFLVDQKKMVSSSKPAAGICSRCGGGASVADMKTQTRFLYVPFYWKYWRAIICTFC 217
           MV FCFLVDQ + V SSKPAAGICSRCGGGASVADMKT TRF YVPFYWK WRAIICTFC
Sbjct: 1   MVCFCFLVDQTRQVRSSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKSWRAIICTFC 60

Query: 218 GAVLKSYR 241
           G++L+SYR
Sbjct: 61  GSILRSYR 68


>ref|XP_002333114.1| predicted protein [Populus trichocarpa]
           gi|224127116|ref|XP_002329403.1| predicted protein
           [Populus trichocarpa] gi|224127118|ref|XP_002329404.1|
           predicted protein [Populus trichocarpa]
           gi|222834905|gb|EEE73354.1| predicted protein [Populus
           trichocarpa] gi|222870453|gb|EEF07584.1| predicted
           protein [Populus trichocarpa]
           gi|222870454|gb|EEF07585.1| predicted protein [Populus
           trichocarpa]
          Length = 68

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/67 (85%), Positives = 59/67 (88%)
 Frame = +2

Query: 38  MVFFCFLVDQKKMVSSSKPAAGICSRCGGGASVADMKTQTRFLYVPFYWKYWRAIICTFC 217
           MV FCFLVDQ + V  SKPAAGICSRCGGGASVADMKT TRF YVPFYWK WRAI+CTFC
Sbjct: 1   MVCFCFLVDQTRKVRRSKPAAGICSRCGGGASVADMKTCTRFCYVPFYWKSWRAIMCTFC 60

Query: 218 GAVLKSY 238
           GAVLKSY
Sbjct: 61  GAVLKSY 67


>ref|XP_002330431.1| predicted protein [Populus trichocarpa]
           gi|224128227|ref|XP_002329112.1| predicted protein
           [Populus trichocarpa] gi|222869781|gb|EEF06912.1|
           predicted protein [Populus trichocarpa]
           gi|222871816|gb|EEF08947.1| predicted protein [Populus
           trichocarpa]
          Length = 68

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/68 (79%), Positives = 58/68 (85%)
 Frame = +2

Query: 38  MVFFCFLVDQKKMVSSSKPAAGICSRCGGGASVADMKTQTRFLYVPFYWKYWRAIICTFC 217
           M FFCFLVDQ + V S KP AG CSRCGGGASVA+M+T TRF YVPFYWK WRAIICTFC
Sbjct: 1   MAFFCFLVDQTRKVRSFKPVAGSCSRCGGGASVANMRTSTRFCYVPFYWKSWRAIICTFC 60

Query: 218 GAVLKSYR 241
           GA+LKSYR
Sbjct: 61  GAILKSYR 68


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