BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043990
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...   148   5e-34
ref|XP_002518591.1| transcription factor, putative [Ricinus comm...   137   1e-30
ref|XP_002319791.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like...   120   1e-25
ref|XP_003541762.1| PREDICTED: transcription factor bHLH112-like...   120   1e-25

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
           gi|297735889|emb|CBI18658.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  148 bits (373), Expect = 5e-34
 Identities = 94/167 (56%), Positives = 112/167 (67%), Gaps = 15/167 (8%)
 Frame = -1

Query: 456 LPGLYELDPQSQQRPYLV----MNYASPVNSPTFSNQ----------FIKTSPPKRQSDT 319
           L GLY+ DPQ QQ  YL     MNY+S  N  T  N+          ++K S PK+Q ++
Sbjct: 210 LQGLYDPDPQPQQ--YLFDNRSMNYSSMANYRTSMNELSPSWPKYSPYMKPSLPKQQPNS 267

Query: 318 NQLHFSNNTPFLNASSNAMNDARSSLSVSTQRPQPQTSPFNEKGSNCSNFPGKFNSAEVQ 139
           + LHF+NNTPF NAS+ A+ND R+S   S Q  Q  T  F EK  NCS    K N+ EV+
Sbjct: 268 H-LHFTNNTPFWNASAAALNDIRASFFPSPQS-QFLTPTFEEK-PNCSKLTTKLNTEEVR 324

Query: 138 DSCSLIKKTS-EPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 1
           DS S++KK+S EP FKRPRIETPSPLPTFKVRKEKLGDRITALQQLV
Sbjct: 325 DSGSVLKKSSAEPAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 371


>ref|XP_002518591.1| transcription factor, putative [Ricinus communis]
           gi|223542436|gb|EEF43978.1| transcription factor,
           putative [Ricinus communis]
          Length = 494

 Score =  137 bits (344), Expect = 1e-30
 Identities = 90/177 (50%), Positives = 107/177 (60%), Gaps = 25/177 (14%)
 Frame = -1

Query: 456 LPGLYELDPQ-----SQQRPYL----VMNYASPVNSPTFSNQ----------FIKTSPPK 334
           + GLYE DPQ      QQ+  L     MNYASP N  T  N+          +I+ S PK
Sbjct: 227 IQGLYEPDPQPQPQQQQQQQSLFSERTMNYASPSNYGTILNELSPSWSKLAPYIRPSLPK 286

Query: 333 RQSDT---NQLHFSNNTPFLN--ASSNAMNDARSSLSVSTQRPQPQ-TSPFNEKGSNCSN 172
           +Q        LHFSNNTPF N   S+ A+ND ++S  V +   QPQ   P  E+  NC N
Sbjct: 287 QQQQPAAGGGLHFSNNTPFWNPSGSATALNDIKASF-VQSNNSQPQYLMPTFEEKPNCPN 345

Query: 171 FPGKFNSAEVQDSCSLIKKTSEPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 1
              K N+ +V+DS S++KK SEP  KR RIETPSPLPTFKVRKEKLGDRITALQQLV
Sbjct: 346 VTLKPNNEQVRDSGSVVKKGSEPAIKRARIETPSPLPTFKVRKEKLGDRITALQQLV 402


>ref|XP_002319791.1| predicted protein [Populus trichocarpa] gi|222858167|gb|EEE95714.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  120 bits (301), Expect = 1e-25
 Identities = 82/162 (50%), Positives = 100/162 (61%), Gaps = 13/162 (8%)
 Frame = -1

Query: 450 GLYELDPQSQQRPY--LVMNYASPVNSPTFSN----------QFIKTSPPKRQSDTNQLH 307
           GL   D Q++Q  +    M+YA   N    +N          QF++ SPPK Q+ +NQLH
Sbjct: 205 GLLISDNQARQSSFENRPMSYAYGANYSLGTNELLPSWPKGPQFLRNSPPK-QTSSNQLH 263

Query: 306 FSNNTPFLNASSNAMNDARSSLSVSTQRPQPQTSPFNEKGSNCSNFPGKFNSAEVQDSCS 127
           FSNNTPF NAS++AMND R S   S Q PQ  TS F+EK         K N +EV+DS  
Sbjct: 264 FSNNTPFWNASASAMNDVRPSYFPSMQ-PQFATSNFDEKP--------KQNISEVRDSNI 314

Query: 126 LIKKT-SEPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQL 4
            +KK+ SE   KRPR E PS LP+FKVRKEK+GDRITALQQL
Sbjct: 315 AVKKSGSEAATKRPRNEIPSSLPSFKVRKEKMGDRITALQQL 356


>ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
          Length = 361

 Score =  120 bits (300), Expect = 1e-25
 Identities = 87/166 (52%), Positives = 102/166 (61%), Gaps = 14/166 (8%)
 Frame = -1

Query: 456 LPGLYELDPQSQQRPY--LVMNY----ASPVNS----PTFSN--QFIKTSPPKRQSDTNQ 313
           L GL   D Q  Q  +    MNY       VNS    P++S   QF++TSPPK+ S T Q
Sbjct: 114 LQGLLGSDHQQNQSSFENRPMNYPYLGTYGVNSNEFLPSWSKVPQFLRTSPPKQPSHT-Q 172

Query: 312 LHFSNNTPFLNASSNAMN-DARSSLSVSTQRPQPQTSPFNEKGSNCSNFPGKFNSAEVQD 136
           LHFSNN PF NAS+ AM  D+R S S + Q PQ  T  FNEK  N         S+E++D
Sbjct: 173 LHFSNNAPFWNASAAAMAADSRPSFSPTLQ-PQFSTPTFNEKPKN---------SSEIRD 222

Query: 135 SCSLIKKTSEPT-FKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 1
             S+ KK+S  T  KRPR ETPSPLP FKVRKEK+GDRITALQQLV
Sbjct: 223 ISSVAKKSSGETGTKRPRSETPSPLPAFKVRKEKMGDRITALQQLV 268


>ref|XP_003541762.1| PREDICTED: transcription factor bHLH112-like [Glycine max]
          Length = 437

 Score =  120 bits (300), Expect = 1e-25
 Identities = 84/168 (50%), Positives = 102/168 (60%), Gaps = 16/168 (9%)
 Frame = -1

Query: 456 LPGLYELDPQSQQRPYLVMN-----YASPVN--------SPTFS--NQFIKTSPPKRQSD 322
           +  LYE +PQ QQ+  L  N      +S  N        SPT+S  +   K S PK+Q  
Sbjct: 180 IQSLYEPEPQPQQQNSLFTNPSMSYSSSSANYGICSNELSPTWSKVSSLPKPSMPKQQ-- 237

Query: 321 TNQLHFSNNTPFLNASSNAMNDARSSLSVSTQRPQPQTSPFNEKGSNCSNFPGKFNSAEV 142
            + LHFSNNT F N+S+ A+ND R+ +  S+Q  Q QT+ F EK  NC N     N  + 
Sbjct: 238 LSGLHFSNNTAFWNSSAEALNDIRAGVFTSSQA-QYQTAKFEEK-PNCPNT--LLNKLKR 293

Query: 141 QDSCSLIKKTS-EPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 1
           ++S    KK S EP FKR RIETPSPLPTFKVRKEKLGDRITALQQLV
Sbjct: 294 EESPDAAKKNSPEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLV 341