BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043982
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1...   207   7e-52
ref|XP_004139300.1| PREDICTED: actin-related protein 6-like [Cuc...   193   1e-47
ref|XP_002527184.1| conserved hypothetical protein [Ricinus comm...   193   1e-47
ref|XP_003522640.1| PREDICTED: actin-related protein 6-like isof...   192   2e-47
gb|ABK95736.1| unknown [Populus trichocarpa]                          192   2e-47

>ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1 [Vitis vinifera]
           gi|297738970|emb|CBI28215.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score =  207 bits (527), Expect = 7e-52
 Identities = 99/137 (72%), Positives = 113/137 (82%)
 Frame = -3

Query: 411 RKPGRDNLFKCTYVLPDGVTYTKGFIKDPGEAQRYRTLPDDSLSLLPITNGESGREEAEE 232
           R+PG+DNLF+CTYVLPDG+TY KGF+KDP EA RYRTL D       +T  +  + E  E
Sbjct: 232 RRPGKDNLFRCTYVLPDGITYMKGFVKDPNEAGRYRTL-DGGAPPSTVTKEDMDQHEVTE 290

Query: 231 KTGDRKKIDLTKNEFNLTNERFLVPEMLFRPADLGMNQAGIAECIVRAVNSCHSYLHPVL 52
           K  DR++IDLTK EFNLTNERFLVPEM+FRPADLGMNQAG+AECI+RAVNSCH  LHPVL
Sbjct: 291 KPEDRRRIDLTKTEFNLTNERFLVPEMIFRPADLGMNQAGLAECIIRAVNSCHPDLHPVL 350

Query: 51  YDSIILTGGSTLFPRFA 1
           Y SIILTGGSTLFP+FA
Sbjct: 351 YQSIILTGGSTLFPQFA 367


>ref|XP_004139300.1| PREDICTED: actin-related protein 6-like [Cucumis sativus]
          Length = 445

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/138 (66%), Positives = 115/138 (83%), Gaps = 1/138 (0%)
 Frame = -3

Query: 411 RKPGRDNLFKCTYVLPDGVTYTKGFIKDPGEAQRYRTLPDDSLSLLPITNGESGRE-EAE 235
           RK G++N F+CTYVLPDGV+YT+GF+K+P +A+RY +L D+ +S   +   +   E +  
Sbjct: 242 RKSGKENFFRCTYVLPDGVSYTRGFVKNPDDAKRYLSLSDEKVSSPSLGVKKDVIELDVS 301

Query: 234 EKTGDRKKIDLTKNEFNLTNERFLVPEMLFRPADLGMNQAGIAECIVRAVNSCHSYLHPV 55
           EKT D+K+IDLTKNEF+LTNERFLVPEM+F PADLGMNQAG+AECIVRAVNSCH +LHPV
Sbjct: 302 EKTEDKKRIDLTKNEFDLTNERFLVPEMIFHPADLGMNQAGLAECIVRAVNSCHPHLHPV 361

Query: 54  LYDSIILTGGSTLFPRFA 1
           LY+SI+LTGGSTLF  FA
Sbjct: 362 LYESIVLTGGSTLFHNFA 379


>ref|XP_002527184.1| conserved hypothetical protein [Ricinus communis]
           gi|223533449|gb|EEF35197.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 449

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/137 (68%), Positives = 110/137 (80%)
 Frame = -3

Query: 411 RKPGRDNLFKCTYVLPDGVTYTKGFIKDPGEAQRYRTLPDDSLSLLPITNGESGREEAEE 232
           RK GRDNL +CTYVLPDG+ +TKGF+KDP EA+RY T   D  +    TN    + E  E
Sbjct: 250 RKRGRDNLLRCTYVLPDGINHTKGFVKDPDEAKRYLT---DGATASLQTNKGIDQPEVSE 306

Query: 231 KTGDRKKIDLTKNEFNLTNERFLVPEMLFRPADLGMNQAGIAECIVRAVNSCHSYLHPVL 52
           K  +RK+ DL+KNEF+LTNERFLVPEM+F PADLG+NQAG+AECIVRAVNSCH  LHPVL
Sbjct: 307 KLEERKRTDLSKNEFDLTNERFLVPEMIFHPADLGLNQAGLAECIVRAVNSCHPLLHPVL 366

Query: 51  YDSIILTGGSTLFPRFA 1
           Y+SIILTGGSTLFPRF+
Sbjct: 367 YESIILTGGSTLFPRFS 383


>ref|XP_003522640.1| PREDICTED: actin-related protein 6-like isoform 1 [Glycine max]
          Length = 436

 Score =  192 bits (488), Expect = 2e-47
 Identities = 96/139 (69%), Positives = 113/139 (81%), Gaps = 2/139 (1%)
 Frame = -3

Query: 411 RKPGRDNLFKCTYVLPDGVTYTKGFIKDPGEAQRYRTLPDDSL-SLLPITNGESGR-EEA 238
           RK G++NLF+CTYVLPDGVTYTKGF+K P +AQRY  L +  L S  P+   E     E 
Sbjct: 232 RKSGKENLFRCTYVLPDGVTYTKGFVKYPDQAQRYLALREGGLHSSSPVQAQEDVNFTEI 291

Query: 237 EEKTGDRKKIDLTKNEFNLTNERFLVPEMLFRPADLGMNQAGIAECIVRAVNSCHSYLHP 58
            E   +RK++DLTKNEF+LTNERFLVPEM+FRPADLGMNQAG+AECIVRAVN+CH +L P
Sbjct: 292 AEHPENRKRVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNACHPHLRP 351

Query: 57  VLYDSIILTGGSTLFPRFA 1
           VLY+SIILTGGSTLFP+FA
Sbjct: 352 VLYESIILTGGSTLFPQFA 370


>gb|ABK95736.1| unknown [Populus trichocarpa]
          Length = 424

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/137 (67%), Positives = 110/137 (80%)
 Frame = -3

Query: 411 RKPGRDNLFKCTYVLPDGVTYTKGFIKDPGEAQRYRTLPDDSLSLLPITNGESGREEAEE 232
           R+ G DN F+CTYVLPDGVT+TKGF+KDP EA++Y T+ D +         E+ ++    
Sbjct: 229 RRRGNDNFFRCTYVLPDGVTHTKGFVKDPDEAKKYLTVGDGAYL-------ETRKDMDRT 281

Query: 231 KTGDRKKIDLTKNEFNLTNERFLVPEMLFRPADLGMNQAGIAECIVRAVNSCHSYLHPVL 52
           +  DRKK+DLTKNEF+LTNERFLVPEM+F PADLGMNQAG+AECIVRAVNSCH  LHP+L
Sbjct: 282 EIMDRKKVDLTKNEFDLTNERFLVPEMIFHPADLGMNQAGLAECIVRAVNSCHPLLHPLL 341

Query: 51  YDSIILTGGSTLFPRFA 1
           Y SIILTGGSTLFPRFA
Sbjct: 342 YQSIILTGGSTLFPRFA 358