BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043943
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni...   278   6e-73
gb|AEL98888.1| DNA primase large subunit, partial [Silene latifo...   273   1e-71
gb|AEL98887.1| DNA primase large subunit, partial [Silene latifo...   273   1e-71
ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|2...   267   8e-70
ref|XP_003524908.1| PREDICTED: probable DNA primase large subuni...   260   9e-68

>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
           gi|297741936|emb|CBI33371.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  278 bits (710), Expect = 6e-73
 Identities = 145/189 (76%), Positives = 165/189 (87%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 LYKSAPPLEVRLDDFELFAIDRLRVLKGISDGLSRGKKPDEMQKLVNELWGANMRHQNAS 385
           LY+SAPPL+VRL+DFELFAIDRLRVLKGISDGLSRGKKPDEM+KLV++LW ANMRH  AS
Sbjct: 22  LYRSAPPLQVRLEDFELFAIDRLRVLKGISDGLSRGKKPDEMEKLVSDLWKANMRHPQAS 81

Query: 384 E-VTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKA 208
           E V KDIISHFVLRLVYCRT+ELRKWFL+MET LFR+RF+LET +AQR L++EF+ PYKA
Sbjct: 82  EFVNKDIISHFVLRLVYCRTEELRKWFLSMETALFRHRFRLETPEAQRVLLAEFDHPYKA 141

Query: 207 ASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVSYSAVPFEEVPELVAGRRVFIHKGY 28
            S+AE E+VK+KL QVARS   S L +AD IYFK     VPFEEVPELVAGRRVF+ KG+
Sbjct: 142 VSHAEFESVKEKLGQVARSFGQS-LPSADAIYFK-----VPFEEVPELVAGRRVFLQKGH 195

Query: 27  AYVAMNQVV 1
           AYVAMNQVV
Sbjct: 196 AYVAMNQVV 204


>gb|AEL98888.1| DNA primase large subunit, partial [Silene latifolia]
          Length = 450

 Score =  273 bits (698), Expect = 1e-71
 Identities = 143/189 (75%), Positives = 166/189 (87%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 LYKSAPPLEVRLDDFELFAIDRLRVLKGISDGLSRGKKPDEMQKLVNELWGANMRHQNAS 385
           LY+S P LEVRL+DFELFAIDRLRVLKGISDGLSRGKKPDEM+ LVN+LW A+MRH  +S
Sbjct: 22  LYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRGKKPDEME-LVNDLWKAHMRHPQSS 80

Query: 384 E-VTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKA 208
           E + KDIISHFVLRLVYCRTDELR WFL+METTLFRYRFKL++ DAQRALM+EF LPYKA
Sbjct: 81  ETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRFKLKSLDAQRALMAEFGLPYKA 140

Query: 207 ASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVSYSAVPFEEVPELVAGRRVFIHKGY 28
            SNAE E+VK+KL QVARS+  S LT+ D++++K     VPFEEVPELVAGRRV+IHKG+
Sbjct: 141 VSNAEFESVKEKLTQVARSMGQS-LTSGDSVFYK-----VPFEEVPELVAGRRVYIHKGH 194

Query: 27  AYVAMNQVV 1
           AYVA++QVV
Sbjct: 195 AYVAVHQVV 203


>gb|AEL98887.1| DNA primase large subunit, partial [Silene latifolia]
          Length = 450

 Score =  273 bits (698), Expect = 1e-71
 Identities = 143/189 (75%), Positives = 166/189 (87%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 LYKSAPPLEVRLDDFELFAIDRLRVLKGISDGLSRGKKPDEMQKLVNELWGANMRHQNAS 385
           LY+S P LEVRL+DFELFAIDRLRVLKGISDGLSRGKKPDEM+ LVN+LW A+MRH  +S
Sbjct: 22  LYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRGKKPDEME-LVNDLWKAHMRHPQSS 80

Query: 384 E-VTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKA 208
           E + KDIISHFVLRLVYCRTDELR WFL+METTLFRYRFKL++ DAQRALM+EF LPYKA
Sbjct: 81  ETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRFKLKSLDAQRALMAEFGLPYKA 140

Query: 207 ASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVSYSAVPFEEVPELVAGRRVFIHKGY 28
            SNAE E+VK+KL QVARS+  S LT+ D++++K     VPFEEVPELVAGRRV+IHKG+
Sbjct: 141 VSNAEFESVKEKLTQVARSMGQS-LTSGDSVFYK-----VPFEEVPELVAGRRVYIHKGH 194

Query: 27  AYVAMNQVV 1
           AYVA++QVV
Sbjct: 195 AYVAVHQVV 203


>ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|222841212|gb|EEE78759.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  267 bits (683), Expect = 8e-70
 Identities = 139/189 (73%), Positives = 159/189 (84%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 LYKSAPPLEVRLDDFELFAIDRLRVLKGISDGLSRGKKPDEMQKLVNELWGANMRHQNAS 385
           LY+SAPPLEVRL+DFEL+AIDRLRVLKG+SDGLSRGK+P+EM+KLVN+LW ANMRH   S
Sbjct: 24  LYRSAPPLEVRLEDFELYAIDRLRVLKGVSDGLSRGKRPEEMEKLVNDLWKANMRHPLPS 83

Query: 384 EVT-KDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKA 208
           EVT KDIISHFVLRLVYCRT+ELRKWFL+ E  LFRYRF+L + +AQR LM+EF+LPYK 
Sbjct: 84  EVTNKDIISHFVLRLVYCRTEELRKWFLSNEIALFRYRFRLLSPEAQRLLMAEFDLPYKP 143

Query: 207 ASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVSYSAVPFEEVPELVAGRRVFIHKGY 28
            + AE E VK+KL  VARS    K TA+D I++K     VPFEEVPELVAGRRVFI KGY
Sbjct: 144 VTTAEFEGVKEKLHLVARSTGQLKPTASDAIFYK-----VPFEEVPELVAGRRVFICKGY 198

Query: 27  AYVAMNQVV 1
           AYVAMNQVV
Sbjct: 199 AYVAMNQVV 207


>ref|XP_003524908.1| PREDICTED: probable DNA primase large subunit-like [Glycine max]
          Length = 457

 Score =  260 bits (665), Expect = 9e-68
 Identities = 133/189 (70%), Positives = 158/189 (83%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 LYKSAPPLEVRLDDFELFAIDRLRVLKGISDGLSRGKKPDEMQKLVNELWGANMRHQNAS 385
           LY+SAPPLEVRL+DFE FAIDRLRVLKGISDG+SRGKK +EM+ LV +LW  NMRHQ A+
Sbjct: 27  LYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMSRGKKAEEMENLVKDLWKVNMRHQEAT 86

Query: 384 EV-TKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKA 208
           +V  KDIISHFVLRLVYCRT++LRKWFL+MET LFRYRF+L   +AQR +M EF+LPY+A
Sbjct: 87  QVLNKDIISHFVLRLVYCRTEDLRKWFLSMETALFRYRFRLLNAEAQRTVMEEFDLPYRA 146

Query: 207 ASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVSYSAVPFEEVPELVAGRRVFIHKGY 28
            SN E E++K+KL QVARS+     T AD I++K     VPFEEVPELVAGRRVFI++GY
Sbjct: 147 VSNVEFESIKEKLGQVARSMGQPSPT-ADAIFYK-----VPFEEVPELVAGRRVFINQGY 200

Query: 27  AYVAMNQVV 1
           AYVAMNQ+V
Sbjct: 201 AYVAMNQIV 209