BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043939
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548457.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucl...    65   6e-09
ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [S...    63   3e-08
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    62   6e-08
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    62   6e-08
gb|EEE54019.1| hypothetical protein OsJ_00679 [Oryza sativa Japo...    61   1e-07

>ref|XP_003548457.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucleotide
            nucleotidyltransferase-like [Glycine max]
          Length = 1087

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/107 (38%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
 Frame = +2

Query: 11   QDGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKLY 190
            QD   W G   G YSV SAYR +                   LWK KI +   LF W+L 
Sbjct: 847  QDSGSWEGDPGGEYSVGSAYRALNEYAIEEDDE----RAFSILWKLKIPSKVSLFAWRLI 902

Query: 191  LHYLPTGDLLHSRKFKGDPTCC-FCYKHLESDLHFFFGCEWIKRLWF 328
               LPT   L +R    D  CC FC  H E   H FFGC  I  LW+
Sbjct: 903  RDRLPTRKNLRNRNVVLDEVCCPFCLNHNEDAGHLFFGCTKIMPLWW 949


>ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [Sorghum bicolor]
           gi|241937010|gb|EES10155.1| hypothetical protein
           SORBIDRAFT_05g025250 [Sorghum bicolor]
          Length = 298

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/107 (31%), Positives = 53/107 (49%)
 Frame = +2

Query: 11  QDGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKLY 190
           +D  +W  HS G++SVKS Y  +             +   + +W+ K+    ++FLW L 
Sbjct: 86  RDVFVWALHSSGSFSVKSMYAALINN---------GVRMSQDIWQIKVPTKIKIFLWYLK 136

Query: 191 LHYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLWFA 331
              + T D L  R++ GD  CCFC+   E+  H F  C ++K LW A
Sbjct: 137 KGVILTKDNLVRRRWNGDTKCCFCHSP-ETIHHLFMDCLFVKFLWRA 182


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
           gi|241946107|gb|EES19252.1| hypothetical protein
           SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/104 (35%), Positives = 49/104 (47%)
 Frame = +2

Query: 14  DGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKLYL 193
           D ++W       +SVKS Y  +                  K+WK KI A  ++FLW L  
Sbjct: 624 DSVVWKVAIARLFSVKSVYNAMTSDESGPSH--------SKIWKSKIPAKIKIFLWLLLN 675

Query: 194 HYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLW 325
           + + T D L  RK+ GDPTC FC +  ES  H FF C   K +W
Sbjct: 676 NVILTKDNLIKRKWIGDPTCYFCDQD-ESVSHLFFHCSTAKAVW 718


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1197

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
 Frame = +2

Query: 14   DGLIWLGHSKGTYSVKSAYR--LIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKL 187
            D  IWLG   G Y+ K+ Y+  L            L+ N   ++W  +     +LFLWK 
Sbjct: 830  DKRIWLGAKDGLYTTKTGYKATLCDVDSDSSRDPVLSFNWFDEVWNVQCSPKIRLFLWKA 889

Query: 188  YLHYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLW 325
                LP G  L  R    DP CC C   LE+  H  F C +++R+W
Sbjct: 890  VSGALPVGSQLAIRIPSFDPVCCRC-GELETSSHALFNCMFVQRVW 934


>gb|EEE54019.1| hypothetical protein OsJ_00679 [Oryza sativa Japonica Group]
          Length = 185

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = +2

Query: 11  QDGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTV---KKLWKHKIEAN*QLFLW 181
           +D  IW  +  G +SVKS Y  I           +N N +   + LWK K+    ++F+W
Sbjct: 75  KDCFIWSLYKNGHFSVKSMYNAI-----------INSNVIIHKRILWKVKVPLKIKVFMW 123

Query: 182 KLYLHYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLW 325
            L+   + T D L  RK++G+  CCFC    E+  HFFF C   +  W
Sbjct: 124 FLHKKVILTKDNLIKRKWRGNKQCCFCNTQ-ETIQHFFFDCHVARFSW 170