BLASTX nr result
ID: Coptis25_contig00043939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043939 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548457.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucl... 65 6e-09 ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [S... 63 3e-08 ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S... 62 6e-08 dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ... 62 6e-08 gb|EEE54019.1| hypothetical protein OsJ_00679 [Oryza sativa Japo... 61 1e-07 >ref|XP_003548457.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase-like [Glycine max] Length = 1087 Score = 65.1 bits (157), Expect = 6e-09 Identities = 41/107 (38%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Frame = +2 Query: 11 QDGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKLY 190 QD W G G YSV SAYR + LWK KI + LF W+L Sbjct: 847 QDSGSWEGDPGGEYSVGSAYRALNEYAIEEDDE----RAFSILWKLKIPSKVSLFAWRLI 902 Query: 191 LHYLPTGDLLHSRKFKGDPTCC-FCYKHLESDLHFFFGCEWIKRLWF 328 LPT L +R D CC FC H E H FFGC I LW+ Sbjct: 903 RDRLPTRKNLRNRNVVLDEVCCPFCLNHNEDAGHLFFGCTKIMPLWW 949 >ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [Sorghum bicolor] gi|241937010|gb|EES10155.1| hypothetical protein SORBIDRAFT_05g025250 [Sorghum bicolor] Length = 298 Score = 62.8 bits (151), Expect = 3e-08 Identities = 34/107 (31%), Positives = 53/107 (49%) Frame = +2 Query: 11 QDGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKLY 190 +D +W HS G++SVKS Y + + + +W+ K+ ++FLW L Sbjct: 86 RDVFVWALHSSGSFSVKSMYAALINN---------GVRMSQDIWQIKVPTKIKIFLWYLK 136 Query: 191 LHYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLWFA 331 + T D L R++ GD CCFC+ E+ H F C ++K LW A Sbjct: 137 KGVILTKDNLVRRRWNGDTKCCFCHSP-ETIHHLFMDCLFVKFLWRA 182 >ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor] gi|241946107|gb|EES19252.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor] Length = 835 Score = 61.6 bits (148), Expect = 6e-08 Identities = 37/104 (35%), Positives = 49/104 (47%) Frame = +2 Query: 14 DGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKLYL 193 D ++W +SVKS Y + K+WK KI A ++FLW L Sbjct: 624 DSVVWKVAIARLFSVKSVYNAMTSDESGPSH--------SKIWKSKIPAKIKIFLWLLLN 675 Query: 194 HYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLW 325 + + T D L RK+ GDPTC FC + ES H FF C K +W Sbjct: 676 NVILTKDNLIKRKWIGDPTCYFCDQD-ESVSHLFFHCSTAKAVW 718 >dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1197 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Frame = +2 Query: 14 DGLIWLGHSKGTYSVKSAYR--LIXXXXXXXXXXXLNLNTVKKLWKHKIEAN*QLFLWKL 187 D IWLG G Y+ K+ Y+ L L+ N ++W + +LFLWK Sbjct: 830 DKRIWLGAKDGLYTTKTGYKATLCDVDSDSSRDPVLSFNWFDEVWNVQCSPKIRLFLWKA 889 Query: 188 YLHYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLW 325 LP G L R DP CC C LE+ H F C +++R+W Sbjct: 890 VSGALPVGSQLAIRIPSFDPVCCRC-GELETSSHALFNCMFVQRVW 934 >gb|EEE54019.1| hypothetical protein OsJ_00679 [Oryza sativa Japonica Group] Length = 185 Score = 60.8 bits (146), Expect = 1e-07 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 11 QDGLIWLGHSKGTYSVKSAYRLIXXXXXXXXXXXLNLNTV---KKLWKHKIEAN*QLFLW 181 +D IW + G +SVKS Y I +N N + + LWK K+ ++F+W Sbjct: 75 KDCFIWSLYKNGHFSVKSMYNAI-----------INSNVIIHKRILWKVKVPLKIKVFMW 123 Query: 182 KLYLHYLPTGDLLHSRKFKGDPTCCFCYKHLESDLHFFFGCEWIKRLW 325 L+ + T D L RK++G+ CCFC E+ HFFF C + W Sbjct: 124 FLHKKVILTKDNLIKRKWRGNKQCCFCNTQ-ETIQHFFFDCHVARFSW 170