BLASTX nr result

ID: Coptis25_contig00043906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043906
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14988.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis ...    63   2e-08
ref|XP_002322180.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002511359.1| UBX domain-containing protein 8-B, putative ...    62   5e-08
ref|XP_004157781.1| PREDICTED: LOW QUALITY PROTEIN: FAS-associat...    59   4e-07

>emb|CBI14988.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -3

Query: 239 GIAGYKLISSFPRKVFGFEQLGMTLNDAGLHPRSSLFLELL 117
           G+  Y+LISSFPR+V+  E++GMTL DA LHPR+SLFLELL
Sbjct: 295 GVGNYRLISSFPRRVYSVEEMGMTLKDACLHPRASLFLELL 335


>ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis vinifera]
          Length = 382

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -3

Query: 239 GIAGYKLISSFPRKVFGFEQLGMTLNDAGLHPRSSLFLELL 117
           G+  Y+LISSFPR+V+  E++GMTL DA LHPR+SLFLELL
Sbjct: 342 GVGNYRLISSFPRRVYSVEEMGMTLKDACLHPRASLFLELL 382


>ref|XP_002322180.1| predicted protein [Populus trichocarpa] gi|222869176|gb|EEF06307.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/41 (63%), Positives = 36/41 (87%)
 Frame = -3

Query: 239 GIAGYKLISSFPRKVFGFEQLGMTLNDAGLHPRSSLFLELL 117
           G+  Y+LISSFPR+V+  +Q+G+TL DAGLHP+++LFLELL
Sbjct: 361 GVGNYRLISSFPRRVYSVDQMGITLKDAGLHPKATLFLELL 401


>ref|XP_002511359.1| UBX domain-containing protein 8-B, putative [Ricinus communis]
           gi|223550474|gb|EEF51961.1| UBX domain-containing
           protein 8-B, putative [Ricinus communis]
          Length = 392

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = -3

Query: 239 GIAGYKLISSFPRKVFGFEQLGMTLNDAGLHPRSSLFLEL 120
           GI  Y+LISSFPR+V+G +Q+G+TL D GLHP+++LFLEL
Sbjct: 352 GIVNYRLISSFPRRVYGVDQMGLTLKDDGLHPKATLFLEL 391


>ref|XP_004157781.1| PREDICTED: LOW QUALITY PROTEIN: FAS-associated factor 2-B-like
           [Cucumis sativus]
          Length = 370

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -3

Query: 239 GIAGYKLISSFPRKVFGFEQLGMTLNDAGLHPRSSLFLE 123
           G   Y+LI+SFPR+V+G +++ MTL DAGLHPR+SLFLE
Sbjct: 330 GTENYRLIASFPRRVYGTDEMNMTLKDAGLHPRASLFLE 368


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