BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043904
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              143   1e-32
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   143   1e-32
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32

>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Glycine max]
          Length = 824

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/104 (66%), Positives = 80/104 (76%)
 Frame = -1

Query: 331  LKGLIKKMKTYGYVPNTSVVVQSVDEHAKEEILLSHSEKLAIGFGLISTPPGAQITIVKN 152
            L+ L  KMK+ GYVP+ S V+Q V+E  KEEIL SHSE+LAI FG+ISTPP + I I KN
Sbjct: 721  LRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKN 780

Query: 151  LRVCIDCHAATKLFSKIERREIVARDSNRFHRFNDGVCSCGDHW 20
            LRVC DCH ATK  SKI  REI+ RDSNRFH F DG+CSCGD+W
Sbjct: 781  LRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/104 (64%), Positives = 80/104 (76%)
 Frame = -1

Query: 331  LKGLIKKMKTYGYVPNTSVVVQSVDEHAKEEILLSHSEKLAIGFGLISTPPGAQITIVKN 152
            L+ L  KMK+ GY+P+ S V+Q V+E  KE IL SHSE+LAI FG+ISTPP + I I KN
Sbjct: 788  LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847

Query: 151  LRVCIDCHAATKLFSKIERREIVARDSNRFHRFNDGVCSCGDHW 20
            LRVC DCH ATK  S+I +REIV RDSNRFH F DG+CSCGD+W
Sbjct: 848  LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/104 (64%), Positives = 80/104 (76%)
 Frame = -1

Query: 331 LKGLIKKMKTYGYVPNTSVVVQSVDEHAKEEILLSHSEKLAIGFGLISTPPGAQITIVKN 152
           L+ L  KMK+ GY+P+ S V+Q V+E  KE IL SHSE+LAI FG+ISTPP + I I KN
Sbjct: 555 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 614

Query: 151 LRVCIDCHAATKLFSKIERREIVARDSNRFHRFNDGVCSCGDHW 20
           LRVC DCH ATK  S+I +REIV RDSNRFH F DG+CSCGD+W
Sbjct: 615 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/104 (64%), Positives = 80/104 (76%)
 Frame = -1

Query: 331  LKGLIKKMKTYGYVPNTSVVVQSVDEHAKEEILLSHSEKLAIGFGLISTPPGAQITIVKN 152
            L+ L  KMK+ GY+P+ S V+Q V+E  KE IL SHSE+LAI FG+ISTPP + I I KN
Sbjct: 788  LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847

Query: 151  LRVCIDCHAATKLFSKIERREIVARDSNRFHRFNDGVCSCGDHW 20
            LRVC DCH ATK  S+I +REIV RDSNRFH F DG+CSCGD+W
Sbjct: 848  LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Cucumis sativus] gi|449476583|ref|XP_004154777.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/104 (62%), Positives = 78/104 (75%)
 Frame = -1

Query: 331  LKGLIKKMKTYGYVPNTSVVVQSVDEHAKEEILLSHSEKLAIGFGLISTPPGAQITIVKN 152
            L+ L  KMK+ GYVP+ + V+Q V++  KE IL SHSE+LA+ FG+ISTPP   + I KN
Sbjct: 713  LRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKN 772

Query: 151  LRVCIDCHAATKLFSKIERREIVARDSNRFHRFNDGVCSCGDHW 20
            LRVC DCH ATK  SKI  REI+ RDSNRFH F DGVCSCGD+W
Sbjct: 773  LRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816