BLASTX nr result

ID: Coptis25_contig00043888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043888
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317132.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003610466.1| hypothetical protein MTR_4g132460 [Medicago ...    62   5e-08
ref|XP_002518441.1| Pectate lyase precursor, putative [Ricinus c...    61   8e-08
ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pec...    61   1e-07
emb|CBI23207.3| unnamed protein product [Vitis vinifera]               61   1e-07

>ref|XP_002317132.1| predicted protein [Populus trichocarpa] gi|222860197|gb|EEE97744.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 92  KVMLFGQNDQFTADKIMKVTVVFNHFGPSLIERMPR 199
           KVML G ND++TADK+MKVTV FNHFGP LIERMPR
Sbjct: 239 KVMLLGHNDEYTADKVMKVTVAFNHFGPGLIERMPR 274


>ref|XP_003610466.1| hypothetical protein MTR_4g132460 [Medicago truncatula]
           gi|357497991|ref|XP_003619284.1| hypothetical protein
           MTR_6g045700 [Medicago truncatula]
           gi|355494299|gb|AES75502.1| hypothetical protein
           MTR_6g045700 [Medicago truncatula]
           gi|355511521|gb|AES92663.1| hypothetical protein
           MTR_4g132460 [Medicago truncatula]
          Length = 385

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +2

Query: 92  KVMLFGQNDQFTADKIMKVTVVFNHFGPSLIERMPR 199
           KVML G ND++TADKIMKVT+VFN FG  LIERMPR
Sbjct: 232 KVMLLGHNDEYTADKIMKVTIVFNRFGSGLIERMPR 267


>ref|XP_002518441.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223542286|gb|EEF43828.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 377

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = +2

Query: 92  KVMLFGQNDQFTADKIMKVTVVFNHFGPSLIERMPR 199
           KVML G ND+++AD++MKVTVV NHFGP L++RMPR
Sbjct: 224 KVMLLGHNDEYSADEVMKVTVVLNHFGPGLVQRMPR 259


>ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 16 [Vitis
           vinifera]
          Length = 397

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 92  KVMLFGQNDQFTADKIMKVTVVFNHFGPSLIERMPR 199
           KVMLFG +D FTADK+M VTV FNHFG  L++RMPR
Sbjct: 244 KVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPR 279


>emb|CBI23207.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 92  KVMLFGQNDQFTADKIMKVTVVFNHFGPSLIERMPR 199
           KVMLFG +D FTADK+M VTV FNHFG  L++RMPR
Sbjct: 195 KVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPR 230


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