BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043875
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520121.1| pentatricopeptide repeat-containing protein,...   144   6e-33
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
emb|CBI40106.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]   138   5e-31
ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29

>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 589

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/109 (63%), Positives = 90/109 (82%)
 Frame = -3

Query: 340 GSLLSACRLYGNVVVGEWVAQRLLELEPVTSSPYVLLSNLYALSGKWDGVADARKMLKGS 161
           GSLLSACRL+G++V+GE +A +LL+L+PVT+SPYVLLSNLYA    W GVA+A KMLK S
Sbjct: 477 GSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYS 536

Query: 160 GVKKEPGYSLVQVKGVVEKFTVGDFSHSFMQETKETLRSLNWEVSRVGL 14
           G+KKEPG+SL+ V G+ EKFT+GD SHS ++E K+T++ LNW VS V +
Sbjct: 537 GLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWTVSEVSI 585


>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/108 (63%), Positives = 89/108 (82%)
 Frame = -3

Query: 337 SLLSACRLYGNVVVGEWVAQRLLELEPVTSSPYVLLSNLYALSGKWDGVADARKMLKGSG 158
           SLLSA RL+G+VV+GE +A+ LL+L+PVT+SPYVLLSNLYA  G WD VA+ARK LKGSG
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 537

Query: 157 VKKEPGYSLVQVKGVVEKFTVGDFSHSFMQETKETLRSLNWEVSRVGL 14
           +KKEPG+SL++V G VEKFT+GDF+H  ++E K  L++L+W V  V L
Sbjct: 538 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAVGEVTL 585


>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/103 (65%), Positives = 87/103 (84%)
 Frame = -3

Query: 337 SLLSACRLYGNVVVGEWVAQRLLELEPVTSSPYVLLSNLYALSGKWDGVADARKMLKGSG 158
           SLLSA RL+G+VV+GE +A+ LL+L+PVT+SPYVLLSNLYA  G WD VA+ARK LKGSG
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 537

Query: 157 VKKEPGYSLVQVKGVVEKFTVGDFSHSFMQETKETLRSLNWEV 29
           +KKEPG+SL++V G VEKFT+GDF+H  ++E K  L++L+W V
Sbjct: 538 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAV 580


>emb|CAN80560.1| hypothetical protein VITISV_031385 [Vitis vinifera]
          Length = 730

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/101 (65%), Positives = 86/101 (85%)
 Frame = -3

Query: 337 SLLSACRLYGNVVVGEWVAQRLLELEPVTSSPYVLLSNLYALSGKWDGVADARKMLKGSG 158
           SLLSA RL+G+VV+GE +A+ LL+L+PVT+SPYVLLSNLYA  G WD VA+ARK LKGSG
Sbjct: 446 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 505

Query: 157 VKKEPGYSLVQVKGVVEKFTVGDFSHSFMQETKETLRSLNW 35
           +KKEPG+SL++V G VEKFT+GDF+H  ++E K  L++L+W
Sbjct: 506 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSW 546


>ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|222854989|gb|EEE92536.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/107 (60%), Positives = 83/107 (77%)
 Frame = -3

Query: 340 GSLLSACRLYGNVVVGEWVAQRLLELEPVTSSPYVLLSNLYALSGKWDGVADARKMLKGS 161
           GSLLSACRL+G+V  G+  A++LL+L+P T+SPYVLLSNLYA    WDGVA+A K+LKGS
Sbjct: 477 GSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGS 536

Query: 160 GVKKEPGYSLVQVKGVVEKFTVGDFSHSFMQETKETLRSLNWEVSRV 20
           G+KKEPG+SL++V G  EKFTV DFSHS ++E  + L+ L W    V
Sbjct: 537 GLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKILRWAAIEV 583