BLASTX nr result
ID: Coptis25_contig00043868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043868 (286 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138451.1| PREDICTED: uncharacterized protein At2g39795... 78 6e-13 ref|NP_196218.1| Mitochondrial glycoprotein family protein [Arab... 78 6e-13 ref|XP_002873233.1| mitochondrial glycoprotein family protein [A... 75 4e-12 ref|XP_002524229.1| conserved hypothetical protein [Ricinus comm... 74 9e-12 ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 >ref|XP_004138451.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Cucumis sativus] gi|449495281|ref|XP_004159787.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Cucumis sativus] Length = 253 Score = 78.2 bits (191), Expect = 6e-13 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 4/98 (4%) Frame = -3 Query: 284 EDDIEDRKCKPMRLLVTIYKRNENCLEFYCHMNPVFILIGSMLVKDP----DDPANDKPY 117 +D+ ++ C P L+V++ K+ LEF C P I I S++VK+P D A + P Sbjct: 142 DDNKANQSCIP--LVVSVSKKTGPSLEFSCSAYPDEISIDSLIVKNPEHSDDQIAYEGPD 199 Query: 116 FKDLDWNLQEAFYKYLEVRGIKPSISKLLYQFLAKKDS 3 F DLD NLQ+AF+KYLE+RGIKPS + L++++ KDS Sbjct: 200 FHDLDENLQKAFHKYLEIRGIKPSTTNFLHEYMINKDS 237 >ref|NP_196218.1| Mitochondrial glycoprotein family protein [Arabidopsis thaliana] gi|10177572|dbj|BAB10804.1| unnamed protein product [Arabidopsis thaliana] gi|14517391|gb|AAK62586.1| AT5g05990/K18J17_19 [Arabidopsis thaliana] gi|15450541|gb|AAK96448.1| AT5g05990/K18J17_19 [Arabidopsis thaliana] gi|21553915|gb|AAM62998.1| unknown [Arabidopsis thaliana] gi|332003569|gb|AED90952.1| Mitochondrial glycoprotein family protein [Arabidopsis thaliana] Length = 259 Score = 78.2 bits (191), Expect = 6e-13 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 9/103 (8%) Frame = -3 Query: 284 EDDIEDRKCKPMR----LLVTIYKRNENCLEFYCHMNPVFILIGSMLVKDPDDPANDK-- 123 ED+ ED+ KP + LLVT+ K+ LEF C P I I M V PDDP+ D+ Sbjct: 141 EDEDEDKPLKPKQSNVPLLVTLSKKTGPSLEFRCTAFPDRIAIKDMWVTFPDDPSKDELA 200 Query: 122 ---PYFKDLDWNLQEAFYKYLEVRGIKPSISKLLYQFLAKKDS 3 P F+ LD L++AF++Y+E+RGIKPS+ L++++ KDS Sbjct: 201 YEGPSFRVLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDS 243 >ref|XP_002873233.1| mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp. lyrata] gi|297319070|gb|EFH49492.1| mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp. lyrata] Length = 259 Score = 75.5 bits (184), Expect = 4e-12 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 7/101 (6%) Frame = -3 Query: 284 EDDIEDRKCKPMR--LLVTIYKRNENCLEFYCHMNPVFILIGSMLVKDPDDPANDK---- 123 EDD + K K LLVT+ K+ + LEF C P I+I M V PDDP+ D+ Sbjct: 143 EDDDKPEKPKQSNVPLLVTLSKKTGSSLEFRCTAFPDKIVIKDMWVTFPDDPSKDELAYE 202 Query: 122 -PYFKDLDWNLQEAFYKYLEVRGIKPSISKLLYQFLAKKDS 3 P F+ LD L++AF++Y+E+RGIKPS+ L++++ KDS Sbjct: 203 GPSFRVLDEKLRKAFHRYIEIRGIKPSMINFLHEYMINKDS 243 >ref|XP_002524229.1| conserved hypothetical protein [Ricinus communis] gi|223536506|gb|EEF38153.1| conserved hypothetical protein [Ricinus communis] Length = 246 Score = 74.3 bits (181), Expect = 9e-12 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 4/97 (4%) Frame = -3 Query: 281 DDIEDRKCKPMRLLVTIYKRNENCLEFYCHMNPVFILIGSMLVKDP----DDPANDKPYF 114 DD+E + L VT+ K N LEF+C P I I S+ VK+P D A + P + Sbjct: 134 DDVEKPTQSSIPLFVTVSKNNGTSLEFHCVAYPDEIAIESLSVKNPELFEDQIAYEGPNY 193 Query: 113 KDLDWNLQEAFYKYLEVRGIKPSISKLLYQFLAKKDS 3 DLD NL+ AF+KYL RGIKPS + L++++ KDS Sbjct: 194 HDLDENLKNAFHKYLLNRGIKPSTTNFLHEYMINKDS 230 >ref|XP_002316261.1| predicted protein [Populus trichocarpa] gi|222865301|gb|EEF02432.1| predicted protein [Populus trichocarpa] Length = 255 Score = 73.9 bits (180), Expect = 1e-11 Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 8/102 (7%) Frame = -3 Query: 284 EDDIEDRKCKPMR----LLVTIYKRNENCLEFYCHMNPVFILIGSMLVKDP----DDPAN 129 E+D++D K +P++ L+VT+ K++ CL+F C I I S+ + P D+ A Sbjct: 138 ENDVDDDKEQPVQSSIPLVVTVSKKSGTCLQFNCVAYADEITIDSISIGVPETSEDEMAF 197 Query: 128 DKPYFKDLDWNLQEAFYKYLEVRGIKPSISKLLYQFLAKKDS 3 D P F DLD NL++ F+KYLE+RGIK S + L++++ KDS Sbjct: 198 DGPNFHDLDENLKKGFHKYLEIRGIKASTTNFLHEYMISKDS 239