BLASTX nr result

ID: Coptis25_contig00043863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043863
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637685.1| FAR1-related protein [Medicago truncatula] g...    73   2e-11
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    71   1e-10
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]    71   1e-10
ref|XP_002275362.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-...    70   1e-10
gb|EEC75396.1| hypothetical protein OsI_11884 [Oryza sativa Indi...    70   2e-10

>ref|XP_003637685.1| FAR1-related protein [Medicago truncatula]
           gi|355503620|gb|AES84823.1| FAR1-related protein
           [Medicago truncatula]
          Length = 793

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = -3

Query: 259 VYTRTMFHFFQDEYKKTLDLCLTLEKEEDTIHIYVVAEMGRKRSRTVTFNVTNKSVQCTC 80
           ++T T+F  FQDE+K  L L + +  E D++  YV+ +   + S  V+FN  + S+ C+C
Sbjct: 448 IHTHTVFELFQDEFKLFLTLSVPIRHESDSLCEYVITKAKHEGSWRVSFNRVSNSITCSC 507

Query: 79  RKFEFHGVLCCHALKLF 29
           RKF+  G+LC HALK+F
Sbjct: 508 RKFDTFGILCSHALKVF 524


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = -3

Query: 310 TIPNLWSKWLVESEASKVYTRTMFHFFQDEYKKTLDLCLTLEKEEDTIHIYVVAEMGRK- 134
           T P+L +   +E +A+++YTR +F  FQ+E  +TL    T  +++D I IY VA+ G   
Sbjct: 511 TSPSLKTPSPMEKQAAELYTRKLFMKFQEELVETLTFLATKVEDQDAISIYRVAKFGESH 570

Query: 133 RSRTVTFNVTNKSVQCTCRKFEFHGVLCCHALKLF 29
           ++  V FNV      C+C+ FEF G+LC H L +F
Sbjct: 571 KAYFVRFNVREMKATCSCQMFEFSGLLCRHILTVF 605


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = -3

Query: 310 TIPNLWSKWLVESEASKVYTRTMFHFFQDEYKKTLDLCLTLEKEEDTIHIYVVAEMGRK- 134
           T P+L +   +E +A+++YTR +F  FQ+E  +TL    T  +++D I IY VA+ G   
Sbjct: 511 TSPSLKTPSPMEKQAAELYTRKLFMKFQEELVETLTFLATKVEDQDAISIYRVAKFGESH 570

Query: 133 RSRTVTFNVTNKSVQCTCRKFEFHGVLCCHALKLF 29
           ++  V FNV      C+C+ FEF G+LC H L +F
Sbjct: 571 KAYFVRFNVREMKATCSCQMFEFSGLLCRHILTVF 605


>ref|XP_002275362.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-like [Vitis vinifera]
          Length = 738

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/94 (39%), Positives = 52/94 (55%)
 Frame = -3

Query: 313 QTIPNLWSKWLVESEASKVYTRTMFHFFQDEYKKTLDLCLTLEKEEDTIHIYVVAEMGRK 134
           + +P+L    ++   A  VYT  +F  FQ EY+K L+L +       ++  Y V      
Sbjct: 479 EQLPSLLGNVILLKHARDVYTPEVFEVFQREYEKCLNLVVNECGSSGSLFEYKVNIYEHS 538

Query: 133 RSRTVTFNVTNKSVQCTCRKFEFHGVLCCHALKL 32
           R   VTFN +N +V C+C KFEF GVLC HALK+
Sbjct: 539 REHKVTFNPSNDTVVCSCMKFEFDGVLCSHALKV 572


>gb|EEC75396.1| hypothetical protein OsI_11884 [Oryza sativa Indica Group]
          Length = 334

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/94 (36%), Positives = 50/94 (53%)
 Frame = -3

Query: 313 QTIPNLWSKWLVESEASKVYTRTMFHFFQDEYKKTLDLCLTLEKEEDTIHIYVVAEMGRK 134
           QT P L ++  +   AS+VYT  MF  FQD+  +TL+  +      D   +Y +   G+ 
Sbjct: 42  QTTPKLKAELNILRHASRVYTAAMFKIFQDQVLQTLNCDIFFCASSDAEKVYKIKVNGKH 101

Query: 133 RSRTVTFNVTNKSVQCTCRKFEFHGVLCCHALKL 32
               V F      V C+C+KFEF G+LC H+LK+
Sbjct: 102 HEHVVKFFAPEVKVSCSCKKFEFAGILCSHSLKV 135


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