BLASTX nr result

ID: Coptis25_contig00043851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043851
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528328.1| PREDICTED: LOW QUALITY PROTEIN: 26.5 kDa hea...    73   2e-11
ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002517628.1| small heat-shock protein, putative [Ricinus ...    71   1e-10
ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mito...    69   3e-10
gb|ACU19816.1| unknown [Glycine max]                                   69   3e-10

>ref|XP_003528328.1| PREDICTED: LOW QUALITY PROTEIN: 26.5 kDa heat shock protein,
           mitochondrial-like [Glycine max]
          Length = 212

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -1

Query: 378 VLTIRGXXXXXXXXXXXXEQWAVYGYYN-NVLLPDDANEDGIQAEMKDGVLKIIIPRTER 202
           VLTI+G               + YGYYN ++LLPDDA  D I+AE+KDGVL + IPRTE+
Sbjct: 142 VLTIKGEHKEEKDDDEHWSSTSSYGYYNTSLLLPDDAKADDIKAELKDGVLTVTIPRTEK 201

Query: 201 PKKDVKEIKIQ 169
           PKKDVK++ ++
Sbjct: 202 PKKDVKQVTVE 212


>ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|222847011|gb|EEE84558.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = -1

Query: 378 VLTIRGXXXXXXXXXXXXEQWAV--YGYYN-NVLLPDDANEDGIQAEMKDGVLKIIIPRT 208
           VLTI+G            E W++  YG YN +++LPDDA  D I+AE+KDGVL I IPRT
Sbjct: 171 VLTIKGELKEEEEEGSDGEHWSMRSYGCYNTSIMLPDDAKTDEIKAELKDGVLYITIPRT 230

Query: 207 ERPKKDVKEIKI 172
           E+PKKDVKEI I
Sbjct: 231 EKPKKDVKEIDI 242


>ref|XP_002517628.1| small heat-shock protein, putative [Ricinus communis]
           gi|223543260|gb|EEF44792.1| small heat-shock protein,
           putative [Ricinus communis]
          Length = 236

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
 Frame = -1

Query: 378 VLTIRGXXXXXXXXXXXXEQ-WAV--YGYYN-NVLLPDDANEDGIQAEMKDGVLKIIIPR 211
           VLTI+G            ++ W++  YGYYN +VLLPDDA  D I+AE+K+GVL I IPR
Sbjct: 163 VLTIKGEHKEEEEEEGSDDEHWSMRSYGYYNTSVLLPDDAKADEIKAELKNGVLHITIPR 222

Query: 210 TERPKKDVKEIKI 172
           TE+PKKDVKE++I
Sbjct: 223 TEQPKKDVKEVQI 235


>ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mitochondrial-like [Glycine
           max]
          Length = 225

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -1

Query: 378 VLTIRGXXXXXXXXXXXXEQWAVYGYYN-NVLLPDDANEDGIQAEMKDGVLKIIIPRTER 202
           VLTI+G               + YGYYN +++LPDDA  D I+AE+KDGVL +IIP+T+ 
Sbjct: 155 VLTIKGEHKEEKDDDEQYWSSSSYGYYNTSLILPDDAKADDIKAELKDGVLTLIIPKTQN 214

Query: 201 PKKDVKEIKIQ 169
           P+KDVK++ I+
Sbjct: 215 PQKDVKQVTIE 225


>gb|ACU19816.1| unknown [Glycine max]
          Length = 225

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -1

Query: 378 VLTIRGXXXXXXXXXXXXEQWAVYGYYN-NVLLPDDANEDGIQAEMKDGVLKIIIPRTER 202
           VLTI+G               + YGYYN +++LPDDA  D I+AE+KDGVL +IIP+T+ 
Sbjct: 155 VLTIKGEHKEEKDDDEQYWSSSSYGYYNTSLILPDDAKADDIKAELKDGVLTLIIPKTQN 214

Query: 201 PKKDVKEIKIQ 169
           P+KDVK++ I+
Sbjct: 215 PQKDVKQVTIE 225


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