BLASTX nr result

ID: Coptis25_contig00043844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043844
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20091.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260...    57   2e-06
emb|CAN83174.1| hypothetical protein VITISV_030882 [Vitis vinifera]    55   5e-06

>emb|CBI20091.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -2

Query: 173 EYTSLSDLKIEIDRDSPSFFMCFWLYIVNSTSPPATIIRQTHPDIEG 33
           +Y+ L DL+++I  +  SF +CFW+Y++NST  PATII Q H DI G
Sbjct: 11  DYSLLKDLRLQIGVEDSSFSLCFWVYLMNSTPFPATIIGQVHSDITG 57


>ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260583 [Vitis vinifera]
          Length = 683

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -2

Query: 173 EYTSLSDLKIEIDRDSPSFFMCFWLYIVNSTSPPATIIRQTHPDIEG 33
           +Y+ L DL+++I  +  SF +CFW+Y++NST  PATII Q H DI G
Sbjct: 11  DYSLLKDLRLQIGVEDSSFSLCFWVYLMNSTPFPATIIGQVHSDITG 57


>emb|CAN83174.1| hypothetical protein VITISV_030882 [Vitis vinifera]
          Length = 384

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -2

Query: 173 EYTSLSDLKIEIDRDSPSFFMCFWLYIVNSTSPPATIIRQTHPDIEG 33
           +Y+ L DL+++I  +  SF +CFW+Y+VNS   PATII Q H DI G
Sbjct: 11  DYSLLKDLRLQIGVEDSSFSLCFWVYLVNSIPFPATIIGQVHSDITG 57


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