BLASTX nr result

ID: Coptis25_contig00043837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043837
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   100   6e-32
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   100   6e-32
emb|CAN76603.1| hypothetical protein VITISV_012932 [Vitis vinifera]   100   3e-31
emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]   102   4e-31
emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]    97   5e-31

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  100 bits (248), Expect(2) = 6e-32
 Identities = 44/57 (77%), Positives = 53/57 (92%)
 Frame = -1

Query: 174 KKDGTWRMCVDSQAINKITIKYRFPIPRLDDLLDQLHGAVVFTMLDLKSDYHQIRIR 4
           KKDG+WRMCVDS+AINKITIKYRFPIPRLDD+LD + G+V+F+ +DL+S YHQIRIR
Sbjct: 668 KKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIR 724



 Score = 62.4 bits (150), Expect(2) = 6e-32
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -3

Query: 313 NRPHYRMSPKEHDELKRQVEDLLSKGHIRESLGLCAVRPVPTLLTPKK 170
           N P YRM+P EH ELKRQV++LL+KG IRESL  C    VP LLTPKK
Sbjct: 625 NLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG---VPALLTPKK 669


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  100 bits (248), Expect(2) = 6e-32
 Identities = 44/57 (77%), Positives = 53/57 (92%)
 Frame = -1

Query: 174 KKDGTWRMCVDSQAINKITIKYRFPIPRLDDLLDQLHGAVVFTMLDLKSDYHQIRIR 4
           KKDG+WRMCVDS+AINKITIKYRFPIPRLDD+LD + G+V+F+ +DL+S YHQIRIR
Sbjct: 627 KKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIR 683



 Score = 62.4 bits (150), Expect(2) = 6e-32
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -3

Query: 313 NRPHYRMSPKEHDELKRQVEDLLSKGHIRESLGLCAVRPVPTLLTPKK 170
           N P YRM+P EH ELKRQV++LL+KG IRESL  C    VP LLTPKK
Sbjct: 584 NLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG---VPALLTPKK 628


>emb|CAN76603.1| hypothetical protein VITISV_012932 [Vitis vinifera]
          Length = 1027

 Score = 99.8 bits (247), Expect(2) = 3e-31
 Identities = 43/57 (75%), Positives = 53/57 (92%)
 Frame = -1

Query: 174 KKDGTWRMCVDSQAINKITIKYRFPIPRLDDLLDQLHGAVVFTMLDLKSDYHQIRIR 4
           KKDG+WRMCVDS+AINKITIKYRFPIPRLDD+LD + G+++F+ +DL+S YHQIRIR
Sbjct: 335 KKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSIIFSKIDLRSGYHQIRIR 391



 Score = 60.5 bits (145), Expect(2) = 3e-31
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = -3

Query: 313 NRPHYRMSPKEHDELKRQVEDLLSKGHIRESLGLCAVRPVPTLLTPKK 170
           N P YRM+P EH ELKRQV++LL+KG I ESL  C    VP LLTPKK
Sbjct: 292 NLPTYRMNPTEHAELKRQVDELLTKGFIHESLSPCG---VPALLTPKK 336


>emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]
          Length = 587

 Score =  102 bits (255), Expect(2) = 4e-31
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = -1

Query: 174 KKDGTWRMCVDSQAINKITIKYRFPIPRLDDLLDQLHGAVVFTMLDLKSDYHQIRIR 4
           KKDGTWRMC+DSQAIN+ TIKYR+PIPRLDD+LD LHGA +F+ +DLKS YHQIRIR
Sbjct: 38  KKDGTWRMCIDSQAINRKTIKYRYPIPRLDDMLDMLHGAKIFSKIDLKSGYHQIRIR 94



 Score = 57.0 bits (136), Expect(2) = 4e-31
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 295 MSPKEHDELKRQVEDLLSKGHIRESLGLCAVRPVPTLLTPKK 170
           M P+EH+EL+RQVE+LL KG+I ES+  CA   VPTLLTPKK
Sbjct: 1   MKPQEHEELQRQVEELLQKGYISESMSPCA---VPTLLTPKK 39


>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
          Length = 1499

 Score = 97.1 bits (240), Expect(2) = 5e-31
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -1

Query: 174 KKDGTWRMCVDSQAINKITIKYRFPIPRLDDLLDQLHGAVVFTMLDLKSDYHQIRIR 4
           KKDG+WRMCVDS+AINKITIKYRFPIPRLDD+LD + G+V+F+ +DL+S YHQI IR
Sbjct: 601 KKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQICIR 657



 Score = 62.4 bits (150), Expect(2) = 5e-31
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -3

Query: 313 NRPHYRMSPKEHDELKRQVEDLLSKGHIRESLGLCAVRPVPTLLTPKK 170
           N P YRM+P EH ELKRQV++LL+KG IRESL  C    VP LLTPKK
Sbjct: 558 NLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCG---VPALLTPKK 602


Top