BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043831
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          114   1e-23
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
emb|CBI30968.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22

>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/126 (41%), Positives = 81/126 (64%)
 Frame = +3

Query: 48  NISKLVFAPVLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLN 227
           N +    A VLKACS   A   G+QIHAQ ++ G SS  ++Q+SL+  YS C ++ ++  
Sbjct: 89  NPNTFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARK 148

Query: 228 VFEKMAQRNVVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGV 407
           VF+++ +RN+V W+ M+  Y +       L +FREMQV G+EPD  ++V +L+AC+ +G 
Sbjct: 149 VFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGA 208

Query: 408 LSLGKW 425
           L +GKW
Sbjct: 209 LDIGKW 214



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/116 (31%), Positives = 64/116 (55%)
 Frame = +3

Query: 75  VLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRN 254
           VL AC+   A   G+ +HA   K  I  D+ + T+LI MY+ CG +E +  +F++M  ++
Sbjct: 199 VLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKD 258

Query: 255 VVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLGK 422
              W++M+         E  L VF  M+ +  +P+H   + +L+AC+  G++S GK
Sbjct: 259 SKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGK 314


>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/116 (44%), Positives = 82/116 (70%)
 Frame = +3

Query: 75  VLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRN 254
           +LKA +K    R GE++H+ +I+ G  S +F+Q +L+ MY++CG  E +  +FE MA+RN
Sbjct: 146 LLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERN 205

Query: 255 VVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLGK 422
           +VTW ++++ Y  + +P   L +FREM + GVEPD F +VSLL+AC+ LG L+LG+
Sbjct: 206 LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGR 261



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/115 (26%), Positives = 64/115 (55%)
 Frame = +3

Query: 75  VLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRN 254
           +L AC++  A   G + H   +K G+  ++    +L+ +Y+ CG +  +  VF++M +++
Sbjct: 247 LLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKS 306

Query: 255 VVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLG 419
           VV+WT+++     +   +  L +F+E++  G+ P     V +L ACS  G++  G
Sbjct: 307 VVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 361



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
 Frame = +3

Query: 42  KENISKLVFAPVLKACSKAYARRPGEQIHAQSIKFGI--SSDIFIQTSLIAMYSSCGQLE 215
           K  I K   A +L   S  +  R   QIHA SI+ G+  ++    +  +  + S C  + 
Sbjct: 35  KSYILKKCIALLLSCASSKFKFR---QIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMS 91

Query: 216 LSLNVFEKMAQRNVVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACS 395
            +  +F ++   N+ TW TM+  Y +SE P   L ++R+M VS +EPD      LL A +
Sbjct: 92  YAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIA 151

Query: 396 RL 401
           +L
Sbjct: 152 KL 153


>ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/123 (43%), Positives = 81/123 (65%)
 Frame = +3

Query: 57  KLVFAPVLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFE 236
           K  F  +LKAC+  +A   G Q HAQ  K G+  D+++  SLI +Y+SCG L ++L VFE
Sbjct: 126 KHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFE 185

Query: 237 KMAQRNVVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSL 416
           KM  R++V+W  M+D+Y++S   E  L +F EMQ +  EPD + + S+++AC+ +G LSL
Sbjct: 186 KMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQ-NSFEPDGYTMQSIVSACAGIGALSL 244

Query: 417 GKW 425
           G W
Sbjct: 245 GMW 247


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/114 (43%), Positives = 80/114 (70%)
 Frame = +3

Query: 81  KACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRNVV 260
           +A +K    R GE++H+ +I+ G  S +F+Q +L+ MY++CG  E +  +FE MA+RN+V
Sbjct: 3   RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62

Query: 261 TWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLGK 422
           TW ++++ Y  + +P   L +FREM + GVEPD F +VSLL+AC+ LG L+LG+
Sbjct: 63  TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGR 116



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/115 (26%), Positives = 64/115 (55%)
 Frame = +3

Query: 75  VLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRN 254
           +L AC++  A   G + H   +K G+  ++    +L+ +Y+ CG +  +  VF++M +++
Sbjct: 102 LLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKS 161

Query: 255 VVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLG 419
           VV+WT+++     +   +  L +F+E++  G+ P     V +L ACS  G++  G
Sbjct: 162 VVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 216


>ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/116 (44%), Positives = 78/116 (67%)
 Frame = +3

Query: 75  VLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRN 254
           +LKA SK+   R GE IH+ +I+ G  S +F+Q SL+ +Y++CG  E +  VFE M +R+
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183

Query: 255 VVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLGK 422
           +V W +M++ +  + +P   L +FREM V GVEPD F +VSLL+A + LG L LG+
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGR 239



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/115 (31%), Positives = 64/115 (55%)
 Frame = +3

Query: 75  VLKACSKAYARRPGEQIHAQSIKFGISSDIFIQTSLIAMYSSCGQLELSLNVFEKMAQRN 254
           +L A ++  A   G ++H   +K G+S +  +  SL+ +Y+ CG +  +  VF +M++RN
Sbjct: 225 LLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERN 284

Query: 255 VVTWTTMMDSYLKSEQPEMVLFVFREMQVSGVEPDHFAIVSLLTACSRLGVLSLG 419
            V+WT+++     +   E  L +F+EM+  G+ P     V +L ACS  G+L  G
Sbjct: 285 AVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEG 339