BLASTX nr result
ID: Coptis25_contig00043826
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043826 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-34 emb|CBI38018.3| unnamed protein product [Vitis vinifera] 148 5e-34 ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ... 148 5e-34 ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Med... 147 7e-34 ref|XP_002512966.1| DNA replication licensing factor MCM4, putat... 146 2e-33 >ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|222849431|gb|EEE86978.1| predicted protein [Populus trichocarpa] Length = 720 Score = 150 bits (379), Expect = 1e-34 Identities = 71/89 (79%), Positives = 83/89 (93%) Frame = +2 Query: 2 PLEVLAIFDLVLLDMAARMNPMFEKHIQVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIR 181 PLEVLAIFD+VL+D+ + + P+FEKH+QVR FNL+SS +MRNLNPSDIEKMVS+KGMIIR Sbjct: 99 PLEVLAIFDIVLMDIVSLIQPLFEKHVQVRIFNLKSSTTMRNLNPSDIEKMVSLKGMIIR 158 Query: 182 CSSIIPEIREAVFKCLVCGYLSDHVIVDR 268 CSSIIPEIREAVFKC+VCGYLSD V+VDR Sbjct: 159 CSSIIPEIREAVFKCIVCGYLSDPVVVDR 187 >emb|CBI38018.3| unnamed protein product [Vitis vinifera] Length = 834 Score = 148 bits (373), Expect = 5e-34 Identities = 70/89 (78%), Positives = 82/89 (92%) Frame = +2 Query: 2 PLEVLAIFDLVLLDMAARMNPMFEKHIQVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIR 181 PLEVLAIFD+VL+DM +R+NP+FEKHIQ R FNL++S SMRNLNPSDIEKMVS+KGMIIR Sbjct: 191 PLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLNPSDIEKMVSLKGMIIR 250 Query: 182 CSSIIPEIREAVFKCLVCGYLSDHVIVDR 268 CSSIIPEIREAVF+CLVC + SD ++VDR Sbjct: 251 CSSIIPEIREAVFRCLVCRHYSDPIVVDR 279 >ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera] Length = 840 Score = 148 bits (373), Expect = 5e-34 Identities = 70/89 (78%), Positives = 82/89 (92%) Frame = +2 Query: 2 PLEVLAIFDLVLLDMAARMNPMFEKHIQVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIR 181 PLEVLAIFD+VL+DM +R+NP+FEKHIQ R FNL++S SMRNLNPSDIEKMVS+KGMIIR Sbjct: 191 PLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLNPSDIEKMVSLKGMIIR 250 Query: 182 CSSIIPEIREAVFKCLVCGYLSDHVIVDR 268 CSSIIPEIREAVF+CLVC + SD ++VDR Sbjct: 251 CSSIIPEIREAVFRCLVCRHYSDPIVVDR 279 >ref|XP_003607002.1| DNA replication licensing factor mcm4-B [Medicago truncatula] gi|355508057|gb|AES89199.1| DNA replication licensing factor mcm4-B [Medicago truncatula] Length = 868 Score = 147 bits (372), Expect = 7e-34 Identities = 70/89 (78%), Positives = 81/89 (91%) Frame = +2 Query: 2 PLEVLAIFDLVLLDMAARMNPMFEKHIQVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIR 181 PLEVLAIFD+VL++M RMNPMFEKH+Q R FNL+SS SMRNLNPSDIE+MVS+KGMIIR Sbjct: 192 PLEVLAIFDMVLMNMVTRMNPMFEKHVQTRIFNLKSSTSMRNLNPSDIERMVSMKGMIIR 251 Query: 182 CSSIIPEIREAVFKCLVCGYLSDHVIVDR 268 CSSIIPEIREA+F+CLVCG+ SD V V+R Sbjct: 252 CSSIIPEIREAIFRCLVCGFCSDPVPVER 280 >ref|XP_002512966.1| DNA replication licensing factor MCM4, putative [Ricinus communis] gi|223547977|gb|EEF49469.1| DNA replication licensing factor MCM4, putative [Ricinus communis] Length = 867 Score = 146 bits (368), Expect = 2e-33 Identities = 67/89 (75%), Positives = 83/89 (93%) Frame = +2 Query: 2 PLEVLAIFDLVLLDMAARMNPMFEKHIQVRTFNLRSSISMRNLNPSDIEKMVSVKGMIIR 181 PLEVLAIFD+VL+D+ + +NP+F+KH+QVR F L++S +MRNLNPSDIEKMVS+KGMIIR Sbjct: 178 PLEVLAIFDIVLMDIVSLINPLFDKHVQVRIFYLKTSTTMRNLNPSDIEKMVSLKGMIIR 237 Query: 182 CSSIIPEIREAVFKCLVCGYLSDHVIVDR 268 CSSIIPEIREA+F+CLVCGYLSD ++VDR Sbjct: 238 CSSIIPEIREAIFRCLVCGYLSDPIVVDR 266