BLASTX nr result

ID: Coptis25_contig00043819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043819
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              64   1e-08
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    63   2e-08
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    63   2e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   1e-07
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    60   1e-07

>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +3

Query: 9   VSFFTTIFSTSHP-NIPTHLPFISPIISDNDNYELIKAVTMEENHYALFAMDPCKAPGSN 185
           VS+F T+F+ S+P NI   L  +  +I+D  N  L    T +E   ALF M P KAPG +
Sbjct: 240 VSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEVRAALFLMHPEKAPGPD 299

Query: 186 GFTPLFYQDNWNFLKKDIFQIINDF 260
           G T LF+Q  W  +K D+  ++N F
Sbjct: 300 GMTALFFQKPWATIKMDMLFLVNSF 324


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/82 (42%), Positives = 45/82 (54%)
 Frame = +3

Query: 18  FTTIFSTSHPNIPTHLPFISPIISDNDNYELIKAVTMEENHYALFAMDPCKAPGSNGFTP 197
           FT   S  H  + +    I P ++D  N EL K V+ EE   ALF + P KAPG +GF  
Sbjct: 476 FTADPSIDHSRVTS---LIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPG 532

Query: 198 LFYQDNWNFLKKDIFQIINDFF 263
            FYQ NW  LK DI + + +FF
Sbjct: 533 RFYQRNWAILKDDIVRAVQEFF 554


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/82 (42%), Positives = 45/82 (54%)
 Frame = +3

Query: 18  FTTIFSTSHPNIPTHLPFISPIISDNDNYELIKAVTMEENHYALFAMDPCKAPGSNGFTP 197
           FT   S  H  + +    I P ++D  N EL K V+ EE   ALF + P KAPG +GF  
Sbjct: 476 FTADPSIDHSRVTS---LIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPG 532

Query: 198 LFYQDNWNFLKKDIFQIINDFF 263
            FYQ NW  LK DI + + +FF
Sbjct: 533 RFYQRNWAILKDDIVRAVQEFF 554


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = +3

Query: 15  FFTTIFSTSHPN---IPTHLPFISPIISDNDNYELIKAVTMEENHYALFAMDPCKAPGSN 185
           +FT+IF++++P+   +   L  + P++++  N  L+K  + EE + AL  M PCKAPG +
Sbjct: 394 YFTSIFTSTNPSDVQLNDVLCCVDPVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPD 453

Query: 186 GFTPLFYQDNWNFLKKDIFQIIN 254
           G   +FYQ  W+ +  D+ Q ++
Sbjct: 454 GMHAIFYQKFWHIIGDDVTQFVS 476


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +3

Query: 15  FFTTIFSTSH-PNIPTHLPFISPIISDNDNYELIKAVTMEENHYALFAMDPCKAPGSNGF 191
           FF  +F++    ++   L  I   + ++ N EL KA + EE   ALF M P KAP  +GF
Sbjct: 132 FFKKLFTSEQCESVEEVLEAIPCKVDESINEELCKAYSDEEIKEALFQMGPTKAPSPDGF 191

Query: 192 TPLFYQDNWNFLKKDIFQIINDF 260
             LFYQ +WNFL+ DI + +  F
Sbjct: 192 PALFYQSHWNFLENDICRAVRGF 214


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