BLASTX nr result

ID: Coptis25_contig00043812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043812
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002522617.1| conserved hypothetical protein [Ricinus comm...   142   3e-32
ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...   133   1e-29
ref|XP_002264959.1| PREDICTED: uncharacterized protein LOC100245...   133   1e-29

>ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|222866959|gb|EEF04090.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  144 bits (363), Expect = 7e-33
 Identities = 72/112 (64%), Positives = 85/112 (75%), Gaps = 3/112 (2%)
 Frame = -3

Query: 327 LYHWGEVRGGMGTWLTHLMKATFGEMNF-ETFDRISG--PACFERAVVMRHNEGGMSRDR 157
           LYHWGE+R  MG WL  L  ATFG   + E+F+ ++   P CFE+AVVMRHNEGGMSRDR
Sbjct: 190 LYHWGELRFEMGPWLRTLTGATFGGAPYTESFEGVNDGQPLCFEKAVVMRHNEGGMSRDR 249

Query: 156 RLEVYDLLRCKARVYCNVSLEDRGADVNDKDVPKIGMTMFMRTGPRSFRNAS 1
           R E YDL+RCKAR+YCNVSLE R  +VN + +P IGMT+FMRTG RSF N S
Sbjct: 250 RTETYDLMRCKARMYCNVSLEGRIPEVNKQGLPVIGMTLFMRTGSRSFTNES 301


>ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis]
           gi|223538093|gb|EEF39704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/112 (64%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -3

Query: 327 LYHWGEVRGGMGTWLTHLMKATFGEM-NFETFDRISG--PACFERAVVMRHNEGGMSRDR 157
           LYHWGE+R  MG WL+ L +ATFG   N E F   +   P CFE+AVVMRHNEGGMS DR
Sbjct: 217 LYHWGELRFNMGLWLSTLTEATFGSPPNIEGFGWANNNEPICFEKAVVMRHNEGGMSTDR 276

Query: 156 RLEVYDLLRCKARVYCNVSLEDRGADVNDKDVPKIGMTMFMRTGPRSFRNAS 1
           R+E YD +RCKAR YCNVSLE  G  V++K +P IGMT+FMRTGPRSF+N S
Sbjct: 277 RIETYDFMRCKARAYCNVSLEG-GNMVSEKGLPVIGMTLFMRTGPRSFKNES 327


>ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|222842804|gb|EEE80351.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/109 (55%), Positives = 82/109 (75%)
 Frame = -3

Query: 327 LYHWGEVRGGMGTWLTHLMKATFGEMNFETFDRISGPACFERAVVMRHNEGGMSRDRRLE 148
           L+HWGE+R  MG+WL HLM+A FG++  E F    GP CFE+AVVMRHNEG M ++R+L+
Sbjct: 131 LFHWGELRSKMGSWLQHLMQANFGDVKIEGFGG-DGPYCFEKAVVMRHNEGSMGKERKLQ 189

Query: 147 VYDLLRCKARVYCNVSLEDRGADVNDKDVPKIGMTMFMRTGPRSFRNAS 1
           V+DLLRC AR +C +S E +G + N++  P I +T+ MRTG RSF+NAS
Sbjct: 190 VFDLLRCNARRFCGISPEGKGQETNERGEPIIRLTLLMRTGSRSFKNAS 238


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/112 (62%), Positives = 80/112 (71%), Gaps = 3/112 (2%)
 Frame = -3

Query: 327 LYHWGEVRGGMGTWLTHLMKATFG-EMNFETFDRIS--GPACFERAVVMRHNEGGMSRDR 157
           LYHWGE+R  MG W+  L++ATFG  +N E F      G ACFE AVVMRHNEGGMSR+R
Sbjct: 225 LYHWGELRMKMGPWVKSLIQATFGGSVNIEEFGDSGDEGVACFEEAVVMRHNEGGMSRER 284

Query: 156 RLEVYDLLRCKARVYCNVSLEDRGADVNDKDVPKIGMTMFMRTGPRSFRNAS 1
           RLEVYD++RCKAR YCNV +E RG  V       IG+TM MRTG RSFRN S
Sbjct: 285 RLEVYDMMRCKARKYCNVRIEGRGLAV-------IGLTMLMRTGARSFRNES 329


>ref|XP_002264959.1| PREDICTED: uncharacterized protein LOC100245802 [Vitis vinifera]
          Length = 476

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/111 (63%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
 Frame = -3

Query: 327 LYHWGEVRGGMGTWLTHLMKATFG-EMNFETF-DRISGPACFERAVVMRHNEGGMSRDRR 154
           LYHWGE+R  MG W+  LM+ATFG  +N E F D   G ACFE AVV RHNEGGMSR+RR
Sbjct: 211 LYHWGELRIKMGPWVKSLMQATFGGSVNIEEFGDSGDGVACFEEAVVTRHNEGGMSRERR 270

Query: 153 LEVYDLLRCKARVYCNVSLEDRGADVNDKDVPKIGMTMFMRTGPRSFRNAS 1
           LEVY+++RCKAR YCNV +E RG  V       IG+TM MRTG RSFRN S
Sbjct: 271 LEVYNMMRCKAREYCNVRIEGRGLTV-------IGLTMLMRTGARSFRNES 314


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