BLASTX nr result

ID: Coptis25_contig00043804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043804
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002281172.1| PREDICTED: protein yeeZ [Vitis vinifera] gi|...    75   6e-12
emb|CAN76003.1| hypothetical protein VITISV_043063 [Vitis vinifera]    73   3e-11
gb|AAG12567.1|AC007797_27 Unknown protein [Arabidopsis thaliana]       70   2e-10
gb|AAZ77736.1| At1g19690-like protein [Arabidopsis lyrata]             70   2e-10

>ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|222842474|gb|EEE80021.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/68 (57%), Positives = 46/68 (67%)
 Frame = -1

Query: 309 LIEKKWPGQIKTRNYSDMSGSNNQAQVLPGQKRVSNARLKNELGVQLFHPTYRSGLESII 130
           LI+KKWPG  K  + S  + S  +     G KRVSN R+K ELGV+L HP+YRSGL SII
Sbjct: 292 LIKKKWPGHTKWSSNSASAASPTKKDNSRGDKRVSNMRMKRELGVRLLHPSYRSGLLSII 351

Query: 129 KSMENPFH 106
             MENPFH
Sbjct: 352 DQMENPFH 359


>ref|XP_002281172.1| PREDICTED: protein yeeZ [Vitis vinifera]
           gi|302142549|emb|CBI19752.3| unnamed protein product
           [Vitis vinifera]
          Length = 351

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/66 (63%), Positives = 46/66 (69%)
 Frame = -1

Query: 309 LIEKKWPGQIKTRNYSDMSGSNNQAQVLPGQKRVSNARLKNELGVQLFHPTYRSGLESII 130
           LIEKKWP  IK    S   GS  QA+     KRVSNAR+K ELGV L HPTYRSGL+SII
Sbjct: 291 LIEKKWPNHIKE---SVFPGSARQAE-----KRVSNARMKKELGVTLLHPTYRSGLQSII 342

Query: 129 KSMENP 112
            +MENP
Sbjct: 343 DNMENP 348


>emb|CAN76003.1| hypothetical protein VITISV_043063 [Vitis vinifera]
          Length = 351

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/66 (62%), Positives = 45/66 (68%)
 Frame = -1

Query: 309 LIEKKWPGQIKTRNYSDMSGSNNQAQVLPGQKRVSNARLKNELGVQLFHPTYRSGLESII 130
           LIEKKWP  IK    S   GS  QA+     KRVSNAR+K ELGV L HPTYRSGL+SII
Sbjct: 291 LIEKKWPNHIKE---SVFPGSARQAE-----KRVSNARMKKELGVTLLHPTYRSGLQSII 342

Query: 129 KSMENP 112
            +M NP
Sbjct: 343 DNMXNP 348


>gb|AAG12567.1|AC007797_27 Unknown protein [Arabidopsis thaliana]
          Length = 167

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/67 (47%), Positives = 51/67 (76%)
 Frame = -1

Query: 309 LIEKKWPGQIKTRNYSDMSGSNNQAQVLPGQKRVSNARLKNELGVQLFHPTYRSGLESII 130
           LIEK+WPG I T+ +  +  S  ++  L G+KRV N R+K++LGV+L +P+Y+SGL+SI+
Sbjct: 102 LIEKRWPGNITTKPFPFLYESREESS-LRGEKRVCNERMKDKLGVKLLYPSYKSGLQSIV 160

Query: 129 KSMENPF 109
           ++M+N F
Sbjct: 161 ENMDNRF 167


>gb|AAZ77736.1| At1g19690-like protein [Arabidopsis lyrata]
          Length = 93

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/67 (47%), Positives = 50/67 (74%)
 Frame = -1

Query: 309 LIEKKWPGQIKTRNYSDMSGSNNQAQVLPGQKRVSNARLKNELGVQLFHPTYRSGLESII 130
           LI K+WPG I T+ +  +  S  ++  L G+KRV N  +KN+LGV+L +P+Y+SGL+SI+
Sbjct: 28  LIVKRWPGIINTKPFPFLYESREESS-LRGEKRVRNEHMKNKLGVKLIYPSYKSGLQSIV 86

Query: 129 KSMENPF 109
           ++M+NPF
Sbjct: 87  ENMDNPF 93


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