BLASTX nr result

ID: Coptis25_contig00043791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043791
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35190.3| unnamed protein product [Vitis vinifera]               55   5e-06
emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]    55   5e-06
ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258...    55   6e-06

>emb|CBI35190.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 41/109 (37%), Positives = 56/109 (51%)
 Frame = -1

Query: 338 KSREKICRELSYSLGGCQSSDPLSHPVYSELKITSDSESEVPFCXXXXXXDSLVHSQDNL 159
           KS E    EL  SL G +  DPLSH  Y+ELKITSDSESE+         +++    +  
Sbjct: 15  KSIESEAAELDLSLSGARL-DPLSHIGYTELKITSDSESEI-LLSDDDDANTIPCETNQP 72

Query: 158 KEDTKDQSVQLGLCTAHTDVLTLSGSLTSEEQVHEVFVPEPSPLVPQAQ 12
           KED    S+          V+TL+  L +E+ +   FV EPS  +PQ +
Sbjct: 73  KEDVTVHSL-----LPEPRVITLADDLATEKLIIPAFVSEPSDAMPQVR 116


>emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]
          Length = 778

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 40/108 (37%), Positives = 53/108 (49%)
 Frame = -1

Query: 350 DGLKKSREKICRELSYSLGGCQSSDPLSHPVYSELKITSDSESEVPFCXXXXXXDSLVHS 171
           D LKK R+K+   ++ S     +SD LSH  YSELK TSDSESEVP         SLVH 
Sbjct: 205 DNLKKIRDKVSGSVTSSSPRNGASDHLSHVGYSELKFTSDSESEVPL-SDDDIVGSLVHE 263

Query: 170 QDNLKEDTKDQSVQLGLCTAHTDVLTLSGSLTSEEQVHEVFVPEPSPL 27
           +   K++          C   +D + L       +Q+H+   P PS L
Sbjct: 264 KSXRKQNLTATXAPERSCKPLSDDVALG------KQIHQASNPGPSLL 305


>ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258654 [Vitis vinifera]
          Length = 877

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/116 (33%), Positives = 58/116 (50%)
 Frame = -1

Query: 359 HLYDGLKKSREKICRELSYSLGGCQSSDPLSHPVYSELKITSDSESEVPFCXXXXXXDSL 180
           H ++GLKK +      +     G +  DPLSH  Y+ELKITSDSESE+         +++
Sbjct: 195 HSHEGLKKKQYIPSGSVGAPQLGSKRLDPLSHIGYTELKITSDSESEI-LLSDDDDANTI 253

Query: 179 VHSQDNLKEDTKDQSVQLGLCTAHTDVLTLSGSLTSEEQVHEVFVPEPSPLVPQAQ 12
               +  KED    S+          V+TL+  L +E+ +   FV EPS  +PQ +
Sbjct: 254 PCETNQPKEDVTVHSL-----LPEPRVITLADDLATEKLIIPAFVSEPSDAMPQVR 304


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