BLASTX nr result

ID: Coptis25_contig00043768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043768
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282766.2| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   129   3e-28
emb|CAN64848.1| hypothetical protein VITISV_036158 [Vitis vinifera]   127   7e-28
emb|CBI32789.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002282735.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   125   4e-27
emb|CAN59905.1| hypothetical protein VITISV_033145 [Vitis vinifera]   125   4e-27

>ref|XP_002282766.2| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Vitis
           vinifera]
          Length = 296

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 6/110 (5%)
 Frame = +2

Query: 74  LEPWKDLQGKVVMVTGAST*IGCDLCLDFAKSGCKIVAAARRINRRKSLCDEINTKW--- 244
           LEPW+DL+GKVVMVTGAS+ +G + CL+ AK+GCKIVAAARR++R KSLCDEIN      
Sbjct: 9   LEPWQDLEGKVVMVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDEINNLTHSN 68

Query: 245 ---TVDTSIRDVAVELDVSTKRSQIKS*VLKSWDAFGRIDALVNNTRVRG 385
                D  +R VAVELDV++  S I + V K+W+AFGRIDAL+NN  +RG
Sbjct: 69  LPPNADPPLRAVAVELDVTSDGSSIGASVQKAWEAFGRIDALLNNAGIRG 118


>emb|CAN64848.1| hypothetical protein VITISV_036158 [Vitis vinifera]
          Length = 286

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 6/110 (5%)
 Frame = +2

Query: 74  LEPWKDLQGKVVMVTGAST*IGCDLCLDFAKSGCKIVAAARRINRRKSLCDEINTKW--- 244
           LEPW+DL+GKVVMVTGAS+ +G + CL+ AK+GCKIVAAARR++R KSLCDEIN      
Sbjct: 9   LEPWQDLEGKVVMVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDEINNLTHSN 68

Query: 245 ---TVDTSIRDVAVELDVSTKRSQIKS*VLKSWDAFGRIDALVNNTRVRG 385
                D  +R VAVELDV++  S I + V K+W+AFGRIDAL+NN  +RG
Sbjct: 69  LPPNDDPPLRAVAVELDVTSDGSSIGASVQKAWEAFGRIDALLNNAGIRG 118


>emb|CBI32789.3| unnamed protein product [Vitis vinifera]
          Length = 271

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 6/110 (5%)
 Frame = +2

Query: 74  LEPWKDLQGKVVMVTGAST*IGCDLCLDFAKSGCKIVAAARRINRRKSLCDEINTKW--- 244
           LEPW+DL+GKVV+VTGAS+ +G + CL+ AK+GCKIVAAARR++R KSLCDEIN      
Sbjct: 9   LEPWQDLEGKVVLVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDEINNLTHSN 68

Query: 245 ---TVDTSIRDVAVELDVSTKRSQIKS*VLKSWDAFGRIDALVNNTRVRG 385
                D  +R V VELDV++  S I + V K+W+AFGRID L+NN  +RG
Sbjct: 69  LPPNADRPVRAVVVELDVTSGGSSISASVQKAWEAFGRIDVLLNNAGIRG 118


>ref|XP_002282735.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Vitis
           vinifera]
          Length = 286

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 6/110 (5%)
 Frame = +2

Query: 74  LEPWKDLQGKVVMVTGAST*IGCDLCLDFAKSGCKIVAAARRINRRKSLCDEINTKW--- 244
           LEPW+DL+GKVV+VTGAS+ +G + CL+ AK+GCKIVAAARR++R KSLCDEIN      
Sbjct: 9   LEPWQDLEGKVVLVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDEINNLTHSN 68

Query: 245 ---TVDTSIRDVAVELDVSTKRSQIKS*VLKSWDAFGRIDALVNNTRVRG 385
                D  +R V VELDV++  S I + V K+W+AFGRID L+NN  +RG
Sbjct: 69  LPPNADRPVRAVVVELDVTSGGSSISASVQKAWEAFGRIDVLLNNAGIRG 118


>emb|CAN59905.1| hypothetical protein VITISV_033145 [Vitis vinifera]
          Length = 316

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 6/110 (5%)
 Frame = +2

Query: 74  LEPWKDLQGKVVMVTGAST*IGCDLCLDFAKSGCKIVAAARRINRRKSLCDEINTKW--- 244
           LEPW+DL+GKVV+VTGAS+ +G + CL+ AK+GCKIVAAARR++R KSLCDEIN      
Sbjct: 9   LEPWQDLEGKVVLVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDEINNLTHSN 68

Query: 245 ---TVDTSIRDVAVELDVSTKRSQIKS*VLKSWDAFGRIDALVNNTRVRG 385
                D  +R V VELDV++  S I + V K+W+AFGRID L+NN  +RG
Sbjct: 69  LPPNADRPVRAVVVELDVTSGGSSISASVQKAWEAFGRIDVLLNNAGIRG 118


Top