BLASTX nr result
ID: Coptis25_contig00043759
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043759 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containi... 137 7e-31 ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi... 134 6e-30 emb|CBI22140.3| unnamed protein product [Vitis vinifera] 134 6e-30 emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera] 134 1e-29 ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi... 133 1e-29 >ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Cucumis sativus] gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Cucumis sativus] Length = 580 Score = 137 bits (346), Expect = 7e-31 Identities = 65/88 (73%), Positives = 73/88 (82%) Frame = +3 Query: 3 LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182 +IFGCGIN KA EAIRLF+EM I PN +TY G+LTAYNHAGLV+EGY CFSSM +HG Sbjct: 405 MIFGCGINSKAHEAIRLFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKDHG 464 Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLI 266 L P ADHYGIMVDLL RAGRL+EA+ LI Sbjct: 465 LAPLADHYGIMVDLLGRAGRLEEAYELI 492 >ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Vitis vinifera] Length = 580 Score = 134 bits (338), Expect = 6e-30 Identities = 64/89 (71%), Positives = 74/89 (83%) Frame = +3 Query: 3 LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182 +I GCGINGKA +AI+LF EM AQI PNSIT+ G+LTAYNHAGLVEEGY+CF+SM ++ Sbjct: 407 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 466 Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269 L+PS DHYGIMVDL RAGRL EA LIK Sbjct: 467 LVPSVDHYGIMVDLFGRAGRLQEALELIK 495 >emb|CBI22140.3| unnamed protein product [Vitis vinifera] Length = 428 Score = 134 bits (338), Expect = 6e-30 Identities = 64/89 (71%), Positives = 74/89 (83%) Frame = +3 Query: 3 LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182 +I GCGINGKA +AI+LF EM AQI PNSIT+ G+LTAYNHAGLVEEGY+CF+SM ++ Sbjct: 255 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 314 Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269 L+PS DHYGIMVDL RAGRL EA LIK Sbjct: 315 LVPSVDHYGIMVDLFGRAGRLQEALELIK 343 >emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera] Length = 841 Score = 134 bits (336), Expect = 1e-29 Identities = 64/89 (71%), Positives = 74/89 (83%) Frame = +3 Query: 3 LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182 +I GCGINGKA +AI+LF EM AQI PN IT+ G+LTAYNHAGLVEEGY+CF+SM ++ Sbjct: 403 MILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 462 Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269 L+PS DHYGIMVDLL RAGRL EA LIK Sbjct: 463 LVPSVDHYGIMVDLLGRAGRLQEALELIK 491 >ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760-like [Vitis vinifera] gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera] Length = 580 Score = 133 bits (335), Expect = 1e-29 Identities = 64/89 (71%), Positives = 73/89 (82%) Frame = +3 Query: 3 LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182 +I GCGINGKA +AI+LF EM AQI PNSIT+ G+LTAYNHAGLVEEGY CF+SM ++ Sbjct: 407 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYN 466 Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269 L+PS DHYGIMVDL RAGRL EA LIK Sbjct: 467 LVPSVDHYGIMVDLFGRAGRLQEALELIK 495