BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043759
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              134   6e-30
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   134   1e-29
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29

>ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
           gi|449529850|ref|XP_004171911.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Cucumis sativus]
          Length = 580

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = +3

Query: 3   LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182
           +IFGCGIN KA EAIRLF+EM    I PN +TY G+LTAYNHAGLV+EGY CFSSM +HG
Sbjct: 405 MIFGCGINSKAHEAIRLFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKDHG 464

Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLI 266
           L P ADHYGIMVDLL RAGRL+EA+ LI
Sbjct: 465 LAPLADHYGIMVDLLGRAGRLEEAYELI 492


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/89 (71%), Positives = 74/89 (83%)
 Frame = +3

Query: 3   LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182
           +I GCGINGKA +AI+LF EM  AQI PNSIT+ G+LTAYNHAGLVEEGY+CF+SM ++ 
Sbjct: 407 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 466

Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269
           L+PS DHYGIMVDL  RAGRL EA  LIK
Sbjct: 467 LVPSVDHYGIMVDLFGRAGRLQEALELIK 495


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/89 (71%), Positives = 74/89 (83%)
 Frame = +3

Query: 3   LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182
           +I GCGINGKA +AI+LF EM  AQI PNSIT+ G+LTAYNHAGLVEEGY+CF+SM ++ 
Sbjct: 255 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 314

Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269
           L+PS DHYGIMVDL  RAGRL EA  LIK
Sbjct: 315 LVPSVDHYGIMVDLFGRAGRLQEALELIK 343


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/89 (71%), Positives = 74/89 (83%)
 Frame = +3

Query: 3   LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182
           +I GCGINGKA +AI+LF EM  AQI PN IT+ G+LTAYNHAGLVEEGY+CF+SM ++ 
Sbjct: 403 MILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 462

Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269
           L+PS DHYGIMVDLL RAGRL EA  LIK
Sbjct: 463 LVPSVDHYGIMVDLLGRAGRLQEALELIK 491


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/89 (71%), Positives = 73/89 (82%)
 Frame = +3

Query: 3   LIFGCGINGKAFEAIRLFREMTTAQIRPNSITYTGILTAYNHAGLVEEGYKCFSSMTEHG 182
           +I GCGINGKA +AI+LF EM  AQI PNSIT+ G+LTAYNHAGLVEEGY CF+SM ++ 
Sbjct: 407 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYN 466

Query: 183 LMPSADHYGIMVDLLSRAGRLDEAHGLIK 269
           L+PS DHYGIMVDL  RAGRL EA  LIK
Sbjct: 467 LVPSVDHYGIMVDLFGRAGRLQEALELIK 495