BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043757
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   120   9e-26
ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   114   6e-24
ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22

>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/90 (64%), Positives = 68/90 (75%)
 Frame = -3

Query: 272 CGSIERALEVFYKIKSKDTYCWNAIICGLALHGYGRAALNFFEDMNTTGLSPDDITFIGL 93
           CGSI++ L+VFYK + KD YCWNA+I GLALHG+G AALN F  M      PDDITFIGL
Sbjct: 292 CGSIQQGLQVFYKSQVKDIYCWNALISGLALHGHGYAALNIFNKMRKNHTRPDDITFIGL 351

Query: 92  LSACSHVGMVEEGRLLFKSMVNTFGVSPKL 3
           LSACSH G+V+EG  LF SM   FG+SPK+
Sbjct: 352 LSACSHSGLVQEGSQLFYSMQKEFGISPKI 381



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/70 (34%), Positives = 43/70 (61%)
 Frame = -3

Query: 263 IERALEVFYKIKSKDTYCWNAIICGLALHGYGRAALNFFEDMNTTGLSPDDITFIGLLSA 84
           +ERA ++F ++ +K+   WN ++ G   +      L+ F++M TT   PD +T  G+LSA
Sbjct: 194 MERACDLFREMPAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVLSA 253

Query: 83  CSHVGMVEEG 54
           C+H G +++G
Sbjct: 254 CAHSGSLKKG 263


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/90 (62%), Positives = 67/90 (74%)
 Frame = -3

Query: 272  CGSIERALEVFYKIKSKDTYCWNAIICGLALHGYGRAALNFFEDMNTTGLSPDDITFIGL 93
            CG+I+R+LEVFYK + KD YCWNAII GLALHGYG AA+   + M   G+ PD+ITFIGL
Sbjct: 1081 CGTIQRSLEVFYKSQVKDIYCWNAIISGLALHGYGHAAVKLLDKMRDNGIRPDEITFIGL 1140

Query: 92   LSACSHVGMVEEGRLLFKSMVNTFGVSPKL 3
            LSACSH  +V+EG  LF  M   FG+ PKL
Sbjct: 1141 LSACSHGSLVQEGCRLFDCMEKEFGLPPKL 1170


>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/90 (62%), Positives = 67/90 (74%)
 Frame = -3

Query: 272 CGSIERALEVFYKIKSKDTYCWNAIICGLALHGYGRAALNFFEDMNTTGLSPDDITFIGL 93
           CG+I+R+LEVFYK + KD YCWNAII GLALHGYG AA+   + M   G+ PD+ITFIGL
Sbjct: 296 CGTIQRSLEVFYKSQVKDIYCWNAIISGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGL 355

Query: 92  LSACSHVGMVEEGRLLFKSMVNTFGVSPKL 3
           LSACSH  +V+EG  LF  M   FG+ PKL
Sbjct: 356 LSACSHRSLVQEGCRLFDCMEKEFGLPPKL 385


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/90 (60%), Positives = 65/90 (72%)
 Frame = -3

Query: 272 CGSIERALEVFYKIKSKDTYCWNAIICGLALHGYGRAALNFFEDMNTTGLSPDDITFIGL 93
           CGSIE+ L VF K + KD YCWNA+I  LALHG+G AAL  F  M    + PDDITFIG+
Sbjct: 292 CGSIEQGLHVFCKSQVKDIYCWNALISALALHGHGYAALKVFGKMRKNHIQPDDITFIGI 351

Query: 92  LSACSHVGMVEEGRLLFKSMVNTFGVSPKL 3
           ++ACSH G+V+EG  LF SM   FG+SPKL
Sbjct: 352 INACSHSGLVQEGCQLFVSMQEDFGISPKL 381


>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/90 (56%), Positives = 65/90 (72%)
 Frame = -3

Query: 272 CGSIERALEVFYKIKSKDTYCWNAIICGLALHGYGRAALNFFEDMNTTGLSPDDITFIGL 93
           CG IE++LE+F  +K KDT  W +IICGLA++G    AL  F +M  TG+ PDDITFIG+
Sbjct: 413 CGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGV 472

Query: 92  LSACSHVGMVEEGRLLFKSMVNTFGVSPKL 3
           LSACSH G+VEEGR  F+SM   + + PKL
Sbjct: 473 LSACSHGGLVEEGRKHFRSMTAVYQIEPKL 502