BLASTX nr result

ID: Coptis25_contig00043739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043739
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72707.1| hypothetical protein VITISV_043786 [Vitis vinifera]    58   7e-08
emb|CAN76505.1| hypothetical protein VITISV_016883 [Vitis vinifera]    55   7e-08
emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]    59   9e-08
emb|CAN69754.1| hypothetical protein VITISV_024938 [Vitis vinifera]    55   1e-07
emb|CAN70866.1| hypothetical protein VITISV_027609 [Vitis vinifera]    56   1e-07

>emb|CAN72707.1| hypothetical protein VITISV_043786 [Vitis vinifera]
          Length = 1372

 Score = 58.2 bits (139), Expect(2) = 7e-08
 Identities = 27/44 (61%), Positives = 37/44 (84%)
 Frame = -3

Query: 132 LIPKKNGALSLKDYRPISLVGGIYKVISKVLASRI*DVLPSIIS 1
           LIPKK GA  L D+RPISLVGG+YK+++KVLA+RI +V+  ++S
Sbjct: 654 LIPKKGGAEELGDFRPISLVGGLYKLLAKVLANRIKNVIGGVVS 697



 Score = 23.1 bits (48), Expect(2) = 7e-08
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 202 IMAVVKEFQDQATLDKRNNSTF-ITHPKK 119
           +M + KEF +  T  K  N+TF +  PKK
Sbjct: 630 VMEMFKEFHEHKTFLKSLNATFLVLIPKK 658


>emb|CAN76505.1| hypothetical protein VITISV_016883 [Vitis vinifera]
          Length = 882

 Score = 54.7 bits (130), Expect(2) = 7e-08
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = -3

Query: 132 LIPKKNGALSLKDYRPISLVGGIYKVISKVLASRI*DVLPSIIS 1
           LIPKK GA  + D+RPISL+GG+YK+++KVLA+R+  V+  ++S
Sbjct: 45  LIPKKGGAEDIGDFRPISLLGGLYKLLAKVLANRLKKVIGKVVS 88



 Score = 26.6 bits (57), Expect(2) = 7e-08
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -2

Query: 205 VIMAVVKEFQDQATLDKRNNSTF-ITHPKK 119
           +I+A+ KEF +Q T  K  N+TF +  PKK
Sbjct: 20  MILAMFKEFHEQKTFLKSLNNTFLVLIPKK 49


>emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]
          Length = 1215

 Score = 58.9 bits (141), Expect(2) = 9e-08
 Identities = 27/44 (61%), Positives = 37/44 (84%)
 Frame = -3

Query: 132 LIPKKNGALSLKDYRPISLVGGIYKVISKVLASRI*DVLPSIIS 1
           LIPKK GA  L D+RPISL+GG+YK+++KVLA+RI +VL  ++S
Sbjct: 565 LIPKKGGAEDLGDFRPISLLGGVYKLLAKVLANRIKEVLDKVVS 608



 Score = 21.9 bits (45), Expect(2) = 9e-08
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 202 IMAVVKEFQDQATLDKRNNSTF-ITHPKK 119
           I+ V KEF +  +  K  NSTF +  PKK
Sbjct: 541 IVDVFKEFFEDKSFAKSLNSTFLVLIPKK 569


>emb|CAN69754.1| hypothetical protein VITISV_024938 [Vitis vinifera]
          Length = 971

 Score = 54.7 bits (130), Expect(2) = 1e-07
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = -3

Query: 132 LIPKKNGALSLKDYRPISLVGGIYKVISKVLASRI*DVLPSIIS 1
           LIPKK GA  + D+RPISL+GG+YK+++KVLA+R+  V+  ++S
Sbjct: 326 LIPKKGGAEDIGDFRPISLLGGLYKLLAKVLANRLKKVIGKVVS 369



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 202 IMAVVKEFQDQATLDKRNNSTF-ITHPKK 119
           I+A+ KEF +Q T  K  N+TF +  PKK
Sbjct: 302 ILAMFKEFHEQKTFLKSLNNTFLVLIPKK 330


>emb|CAN70866.1| hypothetical protein VITISV_027609 [Vitis vinifera]
          Length = 759

 Score = 56.2 bits (134), Expect(2) = 1e-07
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = -3

Query: 132 LIPKKNGALSLKDYRPISLVGGIYKVISKVLASRI*DVLPSIIS 1
           LIPKK G   L D+RPISL+GG+YK+++KVLA+R+ +VL  ++S
Sbjct: 274 LIPKKGGVEDLGDFRPISLLGGLYKLLAKVLANRLKEVLDKVVS 317



 Score = 24.6 bits (52), Expect(2) = 1e-07
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 202 IMAVVKEFQDQATLDKRNNSTF-ITHPKK 119
           IM + KEF D+ +  K  NSTF +  PKK
Sbjct: 250 IMDLFKEFFDEKSFAKSLNSTFLVLIPKK 278


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