BLASTX nr result
ID: Coptis25_contig00043736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00043736
(351 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera] 184 5e-45
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 182 2e-44
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi... 162 3e-38
ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|2... 161 6e-38
gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japo... 157 7e-37
>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 184 bits (468), Expect = 5e-45
Identities = 83/114 (72%), Positives = 101/114 (88%)
Frame = +1
Query: 10 LSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDM 189
L L KMQR+ ++PTHFTYSS+FSACASIGA+EQGKW+HAHMIKSGL+LIA++GNTLLDM
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 190 YSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
Y+KAGS DAK++FDRL K DVVSWN++LTGCA HGL KE + RFE+MLR+G +
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388
Score = 82.0 bits (201), Expect = 5e-14
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 28 MQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSG-LQLIAYVGNTLLDMYSKAG 204
+QR P + YS + C +G VEQG+ +HAH++ S L + N +++MY+K G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 205 SFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DA+++FD + KD+V+W +L+ G + + ++A+ F +MLRLG +
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQ 186
Score = 82.0 bits (201), Expect = 5e-14
Identities = 44/116 (37%), Positives = 64/116 (55%)
Frame = +1
Query: 4 DVLSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLL 183
D L LF +M R +P HFT SS+ A S ++ G +HA +K G Q YVG+ L+
Sbjct: 172 DALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALV 231
Query: 184 DMYSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DMY++ G A+ FD + K VSWN+L++G A G + A+ +M R F+
Sbjct: 232 DMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQ 287
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 182 bits (462), Expect = 2e-44
Identities = 82/114 (71%), Positives = 100/114 (87%)
Frame = +1
Query: 10 LSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDM 189
L L KMQR+ ++PTHFTYSS+ SACASIGA+EQGKW+HAHMIKSGL+LIA++GNTLLDM
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334
Query: 190 YSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
Y+KAGS DAK++FDRL K DVVSWN++LTGCA HGL KE + RFE+MLR+G +
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388
Score = 84.3 bits (207), Expect = 9e-15
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 28 MQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSG-LQLIAYVGNTLLDMYSKAG 204
+QR P + YS + C +G VEQG+ +HAH++ S L + N +++MY+K G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 205 SFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DA+++FD + KD+V+W +L+ G + + ++A+ F +MLRLGF+
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQ 186
Score = 83.6 bits (205), Expect = 2e-14
Identities = 44/116 (37%), Positives = 65/116 (56%)
Frame = +1
Query: 4 DVLSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLL 183
D L LF +M R ++P HFT SS+ A S ++ G +HA +K G Q YVG+ L+
Sbjct: 172 DALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALV 231
Query: 184 DMYSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DMY++ G A+ FD + K VSWN+L++G A G + A+ +M R F+
Sbjct: 232 DMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQ 287
>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 162 bits (409), Expect = 3e-38
Identities = 72/111 (64%), Positives = 96/111 (86%)
Frame = +1
Query: 7 VLSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLD 186
V+ LFL+M R+ ++PTHFTYSS+F+ACAS G++EQGKW+HAH+IKSG Q IAY+GNTL+D
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 187 MYSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLR 339
MY+K+GS KDAKK+F RL K+D+VSWNS+++G A HGL EA+ FE+ML+
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401
Score = 86.7 bits (213), Expect = 2e-15
Identities = 44/116 (37%), Positives = 70/116 (60%)
Frame = +1
Query: 4 DVLSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLL 183
+ L+LF KM ++P FT SS+ A + + G+ +HA +K G + +VG++LL
Sbjct: 189 EALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLL 248
Query: 184 DMYSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DMY++ ++AK IF+ L K+VVSWN+L+ G A G + + F +MLR GF+
Sbjct: 249 DMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFE 304
Score = 81.3 bits (199), Expect = 8e-14
Identities = 38/102 (37%), Positives = 65/102 (63%)
Frame = +1
Query: 46 KPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDMYSKAGSFKDAKK 225
+P YS + + C + ++QG+ IHAH+ S + + N +L+MY+K GS ++A+
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 226 IFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
+FD++ KD+VSW L++G + G A EA++ F +ML LGF+
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
>ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|222854713|gb|EEE92260.1|
predicted protein [Populus trichocarpa]
Length = 590
Score = 161 bits (407), Expect = 6e-38
Identities = 75/108 (69%), Positives = 91/108 (84%)
Frame = +1
Query: 16 LFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDMYS 195
LF M RE KPTHFTYSS+ ACAS+G++EQGKW+HA MIK G +L+A+VGNTLLDMY+
Sbjct: 206 LFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYA 265
Query: 196 KAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLR 339
K+GS +DAKK+FDRL K+DVVSWNS+LTG + HGL K A+ RFEEMLR
Sbjct: 266 KSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR 313
Score = 75.1 bits (183), Expect = 6e-12
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 4 DVLSLFLKMQREEYKPTHFTYSSIFSACASIGAVE--QGKWIHAHMIKSGLQLIAYVGNT 177
D L L +M R KP FT +S+ A + +G+ + QG+ +H ++ G YV
Sbjct: 99 DALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCA 158
Query: 178 LLDMYSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
+LDMY++ ++A+ IFD + K+ VSWN+L+ G A G +A F MLR K
Sbjct: 159 ILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVK 216
Score = 73.6 bits (179), Expect = 2e-11
Identities = 33/94 (35%), Positives = 57/94 (60%)
Frame = +1
Query: 70 SIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDMYSKAGSFKDAKKIFDRLEKK 249
++ C + + +GK IHA ++ S + + NTLL++Y+K G A+K+FD + +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 250 DVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DVV+W +L+TG + H ++A+ EMLR+G K
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLK 113
>gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 157 bits (398), Expect = 7e-37
Identities = 72/112 (64%), Positives = 94/112 (83%)
Frame = +1
Query: 10 LSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDM 189
L +F +MQR ++ THFTYSS+FSA A IGA+EQGKW+HAHMIKSG +L A+VGNT+LDM
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 190 YSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLG 345
Y+K+GS DA+K+FDR++KKDVV+WNS+LT A +GL +EAV+ FEEM + G
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 362
Score = 80.9 bits (198), Expect = 1e-13
Identities = 44/116 (37%), Positives = 64/116 (55%)
Frame = +1
Query: 4 DVLSLFLKMQREEYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLL 183
+ L L M R +KP FT++S+ A + + G+ IHA +K YVG+ LL
Sbjct: 148 EALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALL 207
Query: 184 DMYSKAGSFKDAKKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
DMY++ G A +FD+LE K+ VSWN+L+ G A G + + F EM R GF+
Sbjct: 208 DMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263
Score = 71.2 bits (173), Expect = 8e-11
Identities = 35/104 (33%), Positives = 58/104 (55%)
Frame = +1
Query: 40 EYKPTHFTYSSIFSACASIGAVEQGKWIHAHMIKSGLQLIAYVGNTLLDMYSKAGSFKDA 219
E T Y S+ +ACA +++ + IHAH+ S ++ N+L+ +Y K G+ DA
Sbjct: 59 ELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA 118
Query: 220 KKIFDRLEKKDVVSWNSLLTGCAHHGLAKEAVSRFEEMLRLGFK 351
+++FD + +D+ SW SL+ G A + + EA+ MLR FK
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFK 162