BLASTX nr result
ID: Coptis25_contig00043729
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043729 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK42721.1| unknown [Lotus japonicus] 186 2e-45 gb|AFK48034.1| unknown [Lotus japonicus] 186 2e-45 gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 185 3e-45 sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 183 1e-44 sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 183 1e-44 >gb|AFK42721.1| unknown [Lotus japonicus] Length = 182 Score = 186 bits (472), Expect = 2e-45 Identities = 84/100 (84%), Positives = 91/100 (91%) Frame = +1 Query: 4 KKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWTM 183 KKFETLSYLPPLT EQL+KEVEYLLR +PCLEFE + GFVYRENH+SPGYYDGRYWTM Sbjct: 69 KKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTM 128 Query: 184 WKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303 WKLPMFGC+DAAQVL ELDEA +AYP AF+RIIGFDNVRQ Sbjct: 129 WKLPMFGCSDAAQVLKELDEAVRAYPNAFVRIIGFDNVRQ 168 >gb|AFK48034.1| unknown [Lotus japonicus] Length = 181 Score = 186 bits (471), Expect = 2e-45 Identities = 84/100 (84%), Positives = 90/100 (90%) Frame = +1 Query: 4 KKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWTM 183 KKFETLSYLPPLT EQL+KEVEYLLR +PCLEFE + GFVYRENH+SPGYYDGRYWTM Sbjct: 68 KKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTM 127 Query: 184 WKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303 WKLPMFGC+DA QVL ELDEA KAYP AF+RIIGFDNVRQ Sbjct: 128 WKLPMFGCSDATQVLKELDEAVKAYPNAFVRIIGFDNVRQ 167 >gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha curcas] Length = 181 Score = 185 bits (470), Expect = 3e-45 Identities = 85/101 (84%), Positives = 92/101 (91%) Frame = +1 Query: 1 VKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWT 180 +KKFETLSYLPPLTREQL KEVEYLLRS +PCLEFEL+ GFVYREN+RSPGYYDGRYWT Sbjct: 67 LKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWT 126 Query: 181 MWKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303 MWKLPMFGCTDA QVLNELDEA KA+P F+RIIGFD+ RQ Sbjct: 127 MWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQ 167 >sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate carboxylase [Malus sp.] Length = 183 Score = 183 bits (465), Expect = 1e-44 Identities = 83/101 (82%), Positives = 92/101 (91%) Frame = +1 Query: 1 VKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWT 180 +KKFETLSYLPPL+ E L KEV+YLLR N +PCLEFEL+ GFVYRENHRSPGYYDGRYWT Sbjct: 69 LKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWT 128 Query: 181 MWKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303 MWKLPMFGCTD++QVL EL+EA KAYP +FIRIIGFDNVRQ Sbjct: 129 MWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQ 169 >sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor gi|218021|dbj|BAA00450.1| RuBisCO small subunit [Pyrus pyrifolia var. culta] Length = 183 Score = 183 bits (465), Expect = 1e-44 Identities = 83/101 (82%), Positives = 92/101 (91%) Frame = +1 Query: 1 VKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWT 180 +KKFETLSYLPPL+ E L KEV+YLLR N +PCLEFEL+ GFVYRENHRSPGYYDGRYWT Sbjct: 69 LKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWT 128 Query: 181 MWKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303 MWKLPMFGCTD++QVL EL+EA KAYP +FIRIIGFDNVRQ Sbjct: 129 MWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQ 169