BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043729
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42721.1| unknown [Lotus japonicus]                              186   2e-45
gb|AFK48034.1| unknown [Lotus japonicus]                              186   2e-45
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...   185   3e-45
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox...   183   1e-44
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox...   183   1e-44

>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score =  186 bits (472), Expect = 2e-45
 Identities = 84/100 (84%), Positives = 91/100 (91%)
 Frame = +1

Query: 4   KKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWTM 183
           KKFETLSYLPPLT EQL+KEVEYLLR   +PCLEFE + GFVYRENH+SPGYYDGRYWTM
Sbjct: 69  KKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTM 128

Query: 184 WKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303
           WKLPMFGC+DAAQVL ELDEA +AYP AF+RIIGFDNVRQ
Sbjct: 129 WKLPMFGCSDAAQVLKELDEAVRAYPNAFVRIIGFDNVRQ 168


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  186 bits (471), Expect = 2e-45
 Identities = 84/100 (84%), Positives = 90/100 (90%)
 Frame = +1

Query: 4   KKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWTM 183
           KKFETLSYLPPLT EQL+KEVEYLLR   +PCLEFE + GFVYRENH+SPGYYDGRYWTM
Sbjct: 68  KKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTM 127

Query: 184 WKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303
           WKLPMFGC+DA QVL ELDEA KAYP AF+RIIGFDNVRQ
Sbjct: 128 WKLPMFGCSDATQVLKELDEAVKAYPNAFVRIIGFDNVRQ 167


>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/101 (84%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   VKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWT 180
           +KKFETLSYLPPLTREQL KEVEYLLRS  +PCLEFEL+ GFVYREN+RSPGYYDGRYWT
Sbjct: 67  LKKFETLSYLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWT 126

Query: 181 MWKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303
           MWKLPMFGCTDA QVLNELDEA KA+P  F+RIIGFD+ RQ
Sbjct: 127 MWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQ 167


>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
           carboxylase [Malus sp.]
          Length = 183

 Score =  183 bits (465), Expect = 1e-44
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   VKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWT 180
           +KKFETLSYLPPL+ E L KEV+YLLR N +PCLEFEL+ GFVYRENHRSPGYYDGRYWT
Sbjct: 69  LKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWT 128

Query: 181 MWKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303
           MWKLPMFGCTD++QVL EL+EA KAYP +FIRIIGFDNVRQ
Sbjct: 129 MWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQ 169


>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
           subunit [Pyrus pyrifolia var. culta]
          Length = 183

 Score =  183 bits (465), Expect = 1e-44
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   VKKFETLSYLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENHRSPGYYDGRYWT 180
           +KKFETLSYLPPL+ E L KEV+YLLR N +PCLEFEL+ GFVYRENHRSPGYYDGRYWT
Sbjct: 69  LKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWT 128

Query: 181 MWKLPMFGCTDAAQVLNELDEAAKAYPTAFIRIIGFDNVRQ 303
           MWKLPMFGCTD++QVL EL+EA KAYP +FIRIIGFDNVRQ
Sbjct: 129 MWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQ 169