BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043724
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...    63   3e-08
ref|XP_003629175.1| Acyl coa ligase acetate-coa synthetase-like ...    61   1e-07
emb|CAN62310.1| hypothetical protein VITISV_008928 [Vitis vinifera]    60   2e-07
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                 60   2e-07
emb|CAN81183.1| hypothetical protein VITISV_010634 [Vitis vinifera]    45   4e-07

>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = -3

Query: 252  LISWIAKR*PTVSHSTVESEYHSLLMYVLRLFRFLIFCPIFSCQSYHRSHFIVITLVPRT 73
            L+SW A++ PTVS S+ ESEY +L      L    I     S +S   +      L  + 
Sbjct: 1188 LVSWSARKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAK- 1246

Query: 72   YMASNPDFHARTKLIELDYHFVRE 1
            Y+++NP FHARTK IE+DYHFVR+
Sbjct: 1247 YLSANPIFHARTKHIEVDYHFVRD 1270


>ref|XP_003629175.1| Acyl coa ligase acetate-coa synthetase-like protein [Medicago
           truncatula] gi|355523197|gb|AET03651.1| Acyl coa ligase
           acetate-coa synthetase-like protein [Medicago
           truncatula]
          Length = 732

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
 Frame = -3

Query: 252 LISWIAKR*PTVSHSTVESEYHSL------LMYVLRLFRFLIFCPIFSCQSYHRSHFIVI 91
           LISW +KR P +S S+VE+EY S+      L ++  LFR L F PI      H +  +  
Sbjct: 106 LISWSSKRQPILSRSSVEAEYRSVVNVVSELCWIRNLFRELHF-PI------HHATLVYC 158

Query: 90  TLVPRTYMASNPDFHARTKLIELDYHFVRE 1
             V   Y++ NP  H RTK IE+D HFVRE
Sbjct: 159 DNVSAIYLSGNPVQHQRTKHIEMDIHFVRE 188


>emb|CAN62310.1| hypothetical protein VITISV_008928 [Vitis vinifera]
          Length = 406

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
 Frame = -3

Query: 252 LISWIAKR*PTVSHSTVESEYHSL------LMYVLRLFRFLIFCPIFSCQSYHRSHFIVI 91
           LISW +K+ PT++ S+ ESEY  L      +M++  L   L F       S      +  
Sbjct: 277 LISWTSKKHPTIAQSSTESEYRDLANSTVEIMWLQSLLSKLGF-------SSSNPATLWC 329

Query: 90  TLVPRTYMASNPDFHARTKLIELDYHFVRE 1
             V   Y+ SNP FHARTK IELDYHF+RE
Sbjct: 330 DNVGVIYLCSNPVFHARTKHIELDYHFIRE 359


>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = -3

Query: 252  LISWIAKR*PTVSHSTVESEYHSLLMYVLRLFRFLIFCPIFSCQSYHRSHFIVITLVPRT 73
            LISW AK+ PTVS S+ E+EY +L      +            +   R+      L   T
Sbjct: 887  LISWTAKKQPTVSRSSTEAEYKALANATAEMIWVQKLLNELGVRHPPRARLWCDNL-GAT 945

Query: 72   YMASNPDFHARTKLIELDYHFVRE 1
            Y+++NP FHARTK IE+D+HFVRE
Sbjct: 946  YLSANPIFHARTKHIEIDFHFVRE 969


>emb|CAN81183.1| hypothetical protein VITISV_010634 [Vitis vinifera]
          Length = 519

 Score = 44.7 bits (104), Expect(2) = 4e-07
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -3

Query: 84  VPRTYMASNPDFHARTKLIELDYHFVRE 1
           +  TY+A+NP  HARTK +E+DYHF+RE
Sbjct: 213 ISATYLAANPMLHARTKHVEIDYHFIRE 240



 Score = 34.3 bits (77), Expect(2) = 4e-07
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2

Query: 184 LAHVCAETV*ISHLLSDLQLPVLPPITLYCDNLSTTYL 71
           LA+V AE   I  LL +L + +  P  L CDN+S TYL
Sbjct: 181 LANVVAEVTWIEFLLRELHVCLSHPPLLLCDNISATYL 218