BLASTX nr result

ID: Coptis25_contig00043718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043718
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252...    69   4e-10
emb|CBI18590.3| unnamed protein product [Vitis vinifera]               69   4e-10
emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]    69   4e-10
ref|XP_002316500.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002311946.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252823 [Vitis vinifera]
          Length = 1771

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
 Frame = +1

Query: 1    LAYSELFWKRVEPVFAFPSSNDKTFLKQQQQA--------------------DVVLNEEA 120
            LA S  FWK++EP FA  +  D ++LKQ  Q                     D V  E +
Sbjct: 1014 LACSGSFWKKMEPFFASVNLEDTSYLKQGLQRMEELHESLSQMSGNGKNALNDRVHEESS 1073

Query: 121  SSQNIVCGERQEYQLNGTGS--DVLDATVVAQSQDNSAS-CGGLVADRSFENMIPLSQLL 291
             SQ    GER++ Q+N  GS        +V Q QD  A+ CG L A+R F  + PL Q +
Sbjct: 1074 RSQTHASGEREKNQMNQIGSKESARSENLVDQFQDGDAAICGRLNAERRFNKVTPLYQRV 1133

Query: 292  LSAMIDEDEIEE 327
            LSA+I EDE EE
Sbjct: 1134 LSALIIEDETEE 1145


>emb|CBI18590.3| unnamed protein product [Vitis vinifera]
          Length = 1297

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
 Frame = +1

Query: 1    LAYSELFWKRVEPVFAFPSSNDKTFLKQQQQA--------------------DVVLNEEA 120
            LA S  FWK++EP FA  +  D ++LKQ  Q                     D V  E +
Sbjct: 730  LACSGSFWKKMEPFFASVNLEDTSYLKQGLQRMEELHESLSQMSGNGKNALNDRVHEESS 789

Query: 121  SSQNIVCGERQEYQLNGTGS--DVLDATVVAQSQDNSAS-CGGLVADRSFENMIPLSQLL 291
             SQ    GER++ Q+N  GS        +V Q QD  A+ CG L A+R F  + PL Q +
Sbjct: 790  RSQTHASGEREKNQMNQIGSKESARSENLVDQFQDGDAAICGRLNAERRFNKVTPLYQRV 849

Query: 292  LSAMIDEDEIEE 327
            LSA+I EDE EE
Sbjct: 850  LSALIIEDETEE 861


>emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]
          Length = 1734

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
 Frame = +1

Query: 1    LAYSELFWKRVEPVFAFPSSNDKTFLKQQQQA--------------------DVVLNEEA 120
            LA S  FWK++EP FA  +  D ++LKQ  Q                     D V  E +
Sbjct: 1084 LACSGSFWKKMEPFFASVNLEDTSYLKQGLQRMEELHESLSQMSGNGKNALNDRVHEESS 1143

Query: 121  SSQNIVCGERQEYQLNGTGS--DVLDATVVAQSQDNSAS-CGGLVADRSFENMIPLSQLL 291
             SQ    GER++ Q+N  GS        +V Q QD  A+ CG L A+R F  + PL Q +
Sbjct: 1144 RSQTHASGEREKNQMNQIGSKESARSENLVDQFQDGDAAICGRLNAERRFNKVTPLYQRV 1203

Query: 292  LSAMIDEDEIEE 327
            LSA+I EDE EE
Sbjct: 1204 LSALIIEDETEE 1215


>ref|XP_002316500.1| predicted protein [Populus trichocarpa] gi|222865540|gb|EEF02671.1|
            predicted protein [Populus trichocarpa]
          Length = 1308

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 50/152 (32%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
 Frame = +1

Query: 1    LAYSELFWKRVEPVFAFPSSNDKTFLKQ-------------------QQQADVVLNEEAS 123
            L+ S  FWK++EPVFA   S D +FLKQ                       D+VL E+  
Sbjct: 680  LSCSGSFWKKMEPVFAPVCSEDSSFLKQNLKSTEDLQKRLSEMFGRSNNSGDLVLEEDIP 739

Query: 124  SQNIVCGERQEYQLNGTGSDVL-DATVVAQSQDNSASCGGLVADRSFENMIPLSQLLLSA 300
            SQ +     +  Q      +++  + +V   QD+SA CGG    R   N+ PL Q +LSA
Sbjct: 740  SQLVHEESEENLQDQDRPKNLMRTSDLVNPDQDSSALCGG---TRRRNNVTPLYQRVLSA 796

Query: 301  MIDEDEIEELNCDNGDINGTMHNAFKPNDGDS 396
            +I EDE EE   ++G  N +       + GDS
Sbjct: 797  LIVEDESEEFAENSGGRNISFQYTRDNSPGDS 828


>ref|XP_002311946.1| predicted protein [Populus trichocarpa] gi|222851766|gb|EEE89313.1|
            predicted protein [Populus trichocarpa]
          Length = 1306

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 55/168 (32%), Positives = 76/168 (45%), Gaps = 27/168 (16%)
 Frame = +1

Query: 1    LAYSELFWKRVEPVFAFPSSNDKTFLKQQ-------------------QQADVVLNEEAS 123
            L+ S  FWK++EPVFA   S D ++LKQQ                      D VL E+  
Sbjct: 683  LSCSGSFWKKMEPVFAPICSGDSSYLKQQLKSVEDLHKRLYEMFDCSNNSGDFVLEEDIP 742

Query: 124  SQNIVCGERQEYQLNGTGSD-----VLDATVVAQSQDNSASCGGLVADRSFENMIPLSQL 288
            SQ I     +E + N    D     V  + +V   QDNSA CGG    R+     PL Q 
Sbjct: 743  SQLI----HEESERNLQDQDPPKKLVRTSDLVDPKQDNSAVCGG---SRTRNKATPLYQR 795

Query: 289  LLSAMIDEDEIEELNCDNGDINGTMHNAFKPNDGD---SVESEVGKSD 423
            +LSA+I ED  E+   ++G  N +       + GD   SV+ E G ++
Sbjct: 796  VLSALIVEDGSEKFAENSGGRNISFQCTGDSSPGDDCLSVDFEPGSTN 843


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