BLASTX nr result

ID: Coptis25_contig00043708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043708
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera]   193   1e-47
emb|CBI23601.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   192   3e-47
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   191   7e-47

>ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  194 bits (492), Expect = 8e-48
 Identities = 91/147 (61%), Positives = 112/147 (76%)
 Frame = +3

Query: 3   FFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKNNSNFDLYLSKAANW 182
           FF+VVNH +P+SVLEEM  GV RF+EQD  +KKEYFSRD  R+V  NSNFDLY + + NW
Sbjct: 92  FFEVVNHGIPVSVLEEMKDGVCRFYEQDVELKKEYFSRDYTRKVIYNSNFDLYTASSTNW 151

Query: 183 RDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGDHLKQMQ 362
           RDT+  +M  P P  PEE+PAACRDI IEYTK V  LG +LFEL+SE LGL  +HLK + 
Sbjct: 152 RDTVSYIMA-PGPPMPEELPAACRDILIEYTKEVMKLGNSLFELLSEALGLNPNHLKDID 210

Query: 363 CAESCTLASHYYPACPEPELTIGTARH 443
           C++  T+  HYYPACP+PELT+GT +H
Sbjct: 211 CSKGLTILGHYYPACPQPELTLGTTKH 237


>emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera]
          Length = 373

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/147 (60%), Positives = 114/147 (77%)
 Frame = +3

Query: 3   FFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKNNSNFDLYLSKAANW 182
           FFQVVNH +P SVL +M+ G+ RFHEQD   KKEY+SRD +++V+ NSNFDLY ++ ANW
Sbjct: 100 FFQVVNHGIPESVLNDMIDGIRRFHEQDAETKKEYYSRDSQKKVRFNSNFDLYQARMANW 159

Query: 183 RDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGDHLKQMQ 362
           RD+L  +M  P+P  PE++PA CRDI +EY+++V  LG TLFEL+SE LGL  +HLK M+
Sbjct: 160 RDSLACVMA-PNPPLPEQLPAVCRDIVMEYSEQVMKLGLTLFELLSEALGLNPNHLKDME 218

Query: 363 CAESCTLASHYYPACPEPELTIGTARH 443
           CAE   L  HYYPACPEPELT+GT+ H
Sbjct: 219 CAEGLFLLGHYYPACPEPELTLGTSSH 245


>emb|CBI23601.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  192 bits (487), Expect = 3e-47
 Identities = 89/147 (60%), Positives = 114/147 (77%)
 Frame = +3

Query: 3   FFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKNNSNFDLYLSKAANW 182
           FFQVVNH +P SVL +M+ G+ RFHEQD   KKEY+SRD +++V+ NSNFDLY ++ ANW
Sbjct: 73  FFQVVNHGIPESVLNDMIDGIRRFHEQDAETKKEYYSRDFQKKVRFNSNFDLYQARMANW 132

Query: 183 RDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGDHLKQMQ 362
           RD+L  +M  P+P  PE++PA CRDI +EY+++V  LG TLFEL+SE LGL  +HLK M+
Sbjct: 133 RDSLACVMA-PNPPLPEQLPAVCRDIVMEYSEQVMKLGLTLFELLSEALGLNPNHLKDME 191

Query: 363 CAESCTLASHYYPACPEPELTIGTARH 443
           CAE   L  HYYPACPEPELT+GT+ H
Sbjct: 192 CAEGLFLLGHYYPACPEPELTLGTSSH 218


>ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 373

 Score =  192 bits (487), Expect = 3e-47
 Identities = 89/147 (60%), Positives = 114/147 (77%)
 Frame = +3

Query: 3   FFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKNNSNFDLYLSKAANW 182
           FFQVVNH +P SVL +M+ G+ RFHEQD   KKEY+SRD +++V+ NSNFDLY ++ ANW
Sbjct: 100 FFQVVNHGIPESVLNDMIDGIRRFHEQDAETKKEYYSRDFQKKVRFNSNFDLYQARMANW 159

Query: 183 RDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGDHLKQMQ 362
           RD+L  +M  P+P  PE++PA CRDI +EY+++V  LG TLFEL+SE LGL  +HLK M+
Sbjct: 160 RDSLACVMA-PNPPLPEQLPAVCRDIVMEYSEQVMKLGLTLFELLSEALGLNPNHLKDME 218

Query: 363 CAESCTLASHYYPACPEPELTIGTARH 443
           CAE   L  HYYPACPEPELT+GT+ H
Sbjct: 219 CAEGLFLLGHYYPACPEPELTLGTSSH 245


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  191 bits (484), Expect = 7e-47
 Identities = 91/148 (61%), Positives = 114/148 (77%), Gaps = 1/148 (0%)
 Frame = +3

Query: 3   FFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRD-DRRRVKNNSNFDLYLSKAAN 179
           FF VVNH +P+SVLEEM++GV RFHEQDT VKK++++RD  R++V  NSNFDLY + AAN
Sbjct: 92  FFNVVNHGIPVSVLEEMMEGVRRFHEQDTEVKKQFYTRDASRKKVMYNSNFDLYTAPAAN 151

Query: 180 WRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGDHLKQM 359
           WRDT   LM  P P +PEE+PA+CRDI +EY  +V  LG  LFELISE LGL  +HLK M
Sbjct: 152 WRDTFYCLMA-PHPPNPEELPASCRDILMEYKDQVMRLGFKLFELISEALGLNPNHLKDM 210

Query: 360 QCAESCTLASHYYPACPEPELTIGTARH 443
            CAE  ++  HYYP+CP+PELT+GT +H
Sbjct: 211 DCAEGLSILCHYYPSCPQPELTMGTTKH 238



 Score =  183 bits (464), Expect = 1e-44
 Identities = 90/147 (61%), Positives = 105/147 (71%)
 Frame = +3

Query: 3   FFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKNNSNFDLYLSKAANW 182
           FF VVNH + ++VLEEM  GV RF+EQDT VKK+Y+SRD  R+V  NSNFDLY + AANW
Sbjct: 401 FFNVVNHGISVTVLEEMKDGVRRFYEQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANW 460

Query: 183 RDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGDHLKQMQ 362
           RDT   LM  P P DP+E+P A RDI IEY   V  LG  L ELISE LGL  +HLK M 
Sbjct: 461 RDTFYFLMA-PQPPDPQELPPAFRDILIEYKDEVMKLGFKLLELISEALGLKANHLKDMD 519

Query: 363 CAESCTLASHYYPACPEPELTIGTARH 443
           CAE   +  HYYPACP+PELT+GT +H
Sbjct: 520 CAEGLAMLCHYYPACPQPELTMGTTKH 546


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