BLASTX nr result

ID: Coptis25_contig00043701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043701
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...    84   1e-14
emb|CBI25718.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like...    82   3e-14
ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabido...    80   2e-13

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = +3

Query: 45  SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224
           SR  +I+ G P+KQLIGF+R+H  S + TETSI+V+PC+H S  NE G RI+ LG H +M
Sbjct: 718 SRVPKIVKGTPEKQLIGFSRVHTVSRRSTETSIMVDPCEHFSIANEQGKRIMPLGDHTIM 777

Query: 225 LEDLEHPVSIHI 260
           L D+ H VS+ I
Sbjct: 778 LGDVVHSVSVEI 789


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = +3

Query: 45  SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224
           SR  +I+ G P+KQLIGF+R+H  S + TETSI+V+PC+H S  NE G RI+ LG H +M
Sbjct: 697 SRVPKIVKGTPEKQLIGFSRVHTVSRRSTETSIMVDPCEHFSIANEQGKRIMPLGDHTIM 756

Query: 225 LEDLEHPVSIHI 260
           L D+ H VS+ I
Sbjct: 757 LGDVVHSVSVEI 768


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/72 (55%), Positives = 51/72 (70%)
 Frame = +3

Query: 45  SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224
           SR   +  G P+KQL+GF+R+H  S + TE SILV+PC+HLS  NE G +I+ LG H LM
Sbjct: 708 SRVPTVFRGAPEKQLVGFDRVHTISHRSTEMSILVDPCEHLSVANEQGKKIMLLGGHGLM 767

Query: 225 LEDLEHPVSIHI 260
           L DLEH V+I I
Sbjct: 768 LGDLEHFVTIQI 779


>ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like [Glycine max]
          Length = 780

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/72 (55%), Positives = 52/72 (72%)
 Frame = +3

Query: 45  SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224
           S+  +++ G P+ QL+GF+R+H  SSK TETSILV PC+HLS  ++ G RIL LG H L 
Sbjct: 708 SKGPKVVDGSPETQLVGFSRLHTISSKPTETSILVHPCEHLSFADKQGKRILPLGPHTLS 767

Query: 225 LEDLEHPVSIHI 260
           + DLEH VSI I
Sbjct: 768 VGDLEHVVSIEI 779


>ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319302|gb|EFH49724.1| glycosyl hydrolase
           family 3 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 796

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/79 (46%), Positives = 58/79 (73%)
 Frame = +3

Query: 18  SNQLLLWPTSRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRI 197
           S+ L+L+  S+ +R+L G P+KQLIGF+R+HI S++  ET  +++PCK+LS  N+ G R+
Sbjct: 718 SHVLMLF--SKMARVLSGVPEKQLIGFDRVHIRSNEMMETVFVIDPCKYLSVANDVGKRV 775

Query: 198 LTLGYHILMLEDLEHPVSI 254
           + LG H L L DL+H +S+
Sbjct: 776 IPLGIHALFLGDLQHSLSV 794


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