BLASTX nr result
ID: Coptis25_contig00043701
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043701 (452 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like... 84 1e-14 emb|CBI25718.3| unnamed protein product [Vitis vinifera] 84 1e-14 ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2... 83 3e-14 ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like... 82 3e-14 ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabido... 80 2e-13 >ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera] Length = 789 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/72 (54%), Positives = 52/72 (72%) Frame = +3 Query: 45 SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224 SR +I+ G P+KQLIGF+R+H S + TETSI+V+PC+H S NE G RI+ LG H +M Sbjct: 718 SRVPKIVKGTPEKQLIGFSRVHTVSRRSTETSIMVDPCEHFSIANEQGKRIMPLGDHTIM 777 Query: 225 LEDLEHPVSIHI 260 L D+ H VS+ I Sbjct: 778 LGDVVHSVSVEI 789 >emb|CBI25718.3| unnamed protein product [Vitis vinifera] Length = 768 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/72 (54%), Positives = 52/72 (72%) Frame = +3 Query: 45 SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224 SR +I+ G P+KQLIGF+R+H S + TETSI+V+PC+H S NE G RI+ LG H +M Sbjct: 697 SRVPKIVKGTPEKQLIGFSRVHTVSRRSTETSIMVDPCEHFSIANEQGKRIMPLGDHTIM 756 Query: 225 LEDLEHPVSIHI 260 L D+ H VS+ I Sbjct: 757 LGDVVHSVSVEI 768 >ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1| predicted protein [Populus trichocarpa] Length = 780 Score = 82.8 bits (203), Expect = 3e-14 Identities = 40/72 (55%), Positives = 51/72 (70%) Frame = +3 Query: 45 SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224 SR + G P+KQL+GF+R+H S + TE SILV+PC+HLS NE G +I+ LG H LM Sbjct: 708 SRVPTVFRGAPEKQLVGFDRVHTISHRSTEMSILVDPCEHLSVANEQGKKIMLLGGHGLM 767 Query: 225 LEDLEHPVSIHI 260 L DLEH V+I I Sbjct: 768 LGDLEHFVTIQI 779 >ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like [Glycine max] Length = 780 Score = 82.4 bits (202), Expect = 3e-14 Identities = 40/72 (55%), Positives = 52/72 (72%) Frame = +3 Query: 45 SRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRILTLGYHILM 224 S+ +++ G P+ QL+GF+R+H SSK TETSILV PC+HLS ++ G RIL LG H L Sbjct: 708 SKGPKVVDGSPETQLVGFSRLHTISSKPTETSILVHPCEHLSFADKQGKRILPLGPHTLS 767 Query: 225 LEDLEHPVSIHI 260 + DLEH VSI I Sbjct: 768 VGDLEHVVSIEI 779 >ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] gi|297319302|gb|EFH49724.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] Length = 796 Score = 80.1 bits (196), Expect = 2e-13 Identities = 37/79 (46%), Positives = 58/79 (73%) Frame = +3 Query: 18 SNQLLLWPTSRQSRILGGGPQKQLIGFNRIHIESSKDTETSILVEPCKHLSTVNENGIRI 197 S+ L+L+ S+ +R+L G P+KQLIGF+R+HI S++ ET +++PCK+LS N+ G R+ Sbjct: 718 SHVLMLF--SKMARVLSGVPEKQLIGFDRVHIRSNEMMETVFVIDPCKYLSVANDVGKRV 775 Query: 198 LTLGYHILMLEDLEHPVSI 254 + LG H L L DL+H +S+ Sbjct: 776 IPLGIHALFLGDLQHSLSV 794