BLASTX nr result
ID: Coptis25_contig00043689
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043689 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 140 1e-31 gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group] 136 2e-30 gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subc... 135 3e-30 emb|CAA73042.1| polyprotein [Ananas comosus] 135 3e-30 emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group] 135 3e-30 >gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] Length = 1771 Score = 140 bits (353), Expect = 1e-31 Identities = 66/103 (64%), Positives = 81/103 (78%) Frame = -3 Query: 313 FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134 FW E + FLGHVVS EGI VDP K+ A+++ PT+VTEIRSF+GLAGYYRRF+E FS I Sbjct: 1023 FWLESVAFLGHVVSKEGIRVDPAKIEAIRDWVRPTSVTEIRSFVGLAGYYRRFVEGFSTI 1082 Query: 133 VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIPTRG 5 ALLT+LTR DV F+W+ +CE +FL LK+ LTTAPIL +P G Sbjct: 1083 AALLTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEG 1125 >gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group] Length = 2408 Score = 136 bits (342), Expect = 2e-30 Identities = 63/100 (63%), Positives = 79/100 (79%) Frame = -3 Query: 313 FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134 FW E++FLGHV+SS G+AVDP V +V K P TVTEIRSFLGLAGYYRRFIE FS I Sbjct: 735 FWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVTEIRSFLGLAGYYRRFIENFSKI 794 Query: 133 VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIP 14 +T+L +K+VK+ WT DCE++F ELK+RL TAP+L++P Sbjct: 795 ARPMTRLLQKEVKYKWTEDCERSFQELKKRLVTAPVLILP 834 >gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1778 Score = 135 bits (341), Expect = 3e-30 Identities = 63/100 (63%), Positives = 79/100 (79%) Frame = -3 Query: 313 FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134 FW E++FLGHV+SS G+AVDP V +V K P TV+EIRSFLGLAGYYRRFIE FS I Sbjct: 1032 FWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKI 1091 Query: 133 VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIP 14 +T+L +KDVK+ WT DCE++F ELK+RL TAP+L++P Sbjct: 1092 ARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVTAPVLILP 1131 >emb|CAA73042.1| polyprotein [Ananas comosus] Length = 871 Score = 135 bits (341), Expect = 3e-30 Identities = 63/103 (61%), Positives = 81/103 (78%) Frame = -3 Query: 313 FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134 FW E+ FLGH++S GIAVDP+K+ A+K+ T+VTEIRSFLGLAGYYRRF+E+F+ + Sbjct: 208 FWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKL 267 Query: 133 VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIPTRG 5 LT+LT K VKF+W + CE++F ELKQRLTTAPIL +P G Sbjct: 268 STPLTRLTHKGVKFIWNDACERSFQELKQRLTTAPILTLPVAG 310 >emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group] Length = 1481 Score = 135 bits (341), Expect = 3e-30 Identities = 62/100 (62%), Positives = 79/100 (79%) Frame = -3 Query: 313 FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134 FW E++FLGHV+SS G+AVDP V +V K P TV+E+RSFLGLAGYYRRFIE FS I Sbjct: 735 FWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFSKI 794 Query: 133 VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIP 14 +T+L +K+VKF WT DCE++F ELK+RL TAP+L++P Sbjct: 795 ARPMTRLLQKEVKFKWTEDCERSFQELKERLVTAPVLILP 834