BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043689
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     140   1e-31
gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]     136   2e-30
gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subc...   135   3e-30
emb|CAA73042.1| polyprotein [Ananas comosus]                          135   3e-30
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                135   3e-30

>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = -3

Query: 313  FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134
            FW E + FLGHVVS EGI VDP K+ A+++   PT+VTEIRSF+GLAGYYRRF+E FS I
Sbjct: 1023 FWLESVAFLGHVVSKEGIRVDPAKIEAIRDWVRPTSVTEIRSFVGLAGYYRRFVEGFSTI 1082

Query: 133  VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIPTRG 5
             ALLT+LTR DV F+W+ +CE +FL LK+ LTTAPIL +P  G
Sbjct: 1083 AALLTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEG 1125


>gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 2408

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/100 (63%), Positives = 79/100 (79%)
 Frame = -3

Query: 313  FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134
            FW  E++FLGHV+SS G+AVDP  V +V   K P TVTEIRSFLGLAGYYRRFIE FS I
Sbjct: 735  FWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVTEIRSFLGLAGYYRRFIENFSKI 794

Query: 133  VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIP 14
               +T+L +K+VK+ WT DCE++F ELK+RL TAP+L++P
Sbjct: 795  ARPMTRLLQKEVKYKWTEDCERSFQELKKRLVTAPVLILP 834


>gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1778

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/100 (63%), Positives = 79/100 (79%)
 Frame = -3

Query: 313  FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134
            FW  E++FLGHV+SS G+AVDP  V +V   K P TV+EIRSFLGLAGYYRRFIE FS I
Sbjct: 1032 FWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKI 1091

Query: 133  VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIP 14
               +T+L +KDVK+ WT DCE++F ELK+RL TAP+L++P
Sbjct: 1092 ARPMTRLLQKDVKYKWTEDCEQSFQELKKRLVTAPVLILP 1131


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/103 (61%), Positives = 81/103 (78%)
 Frame = -3

Query: 313 FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134
           FW  E+ FLGH++S  GIAVDP+K+ A+K+    T+VTEIRSFLGLAGYYRRF+E+F+ +
Sbjct: 208 FWLREVAFLGHLISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKL 267

Query: 133 VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIPTRG 5
              LT+LT K VKF+W + CE++F ELKQRLTTAPIL +P  G
Sbjct: 268 STPLTRLTHKGVKFIWNDACERSFQELKQRLTTAPILTLPVAG 310


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/100 (62%), Positives = 79/100 (79%)
 Frame = -3

Query: 313  FWEEEIRFLGHVVSSEGIAVDPEKVAAVKE*K*PTTVTEIRSFLGLAGYYRRFIEKFSLI 134
            FW  E++FLGHV+SS G+AVDP  V +V   K P TV+E+RSFLGLAGYYRRFIE FS I
Sbjct: 735  FWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFSKI 794

Query: 133  VALLTKLTRKDVKFMWTNDCEKAFLELKQRLTTAPILVIP 14
               +T+L +K+VKF WT DCE++F ELK+RL TAP+L++P
Sbjct: 795  ARPMTRLLQKEVKFKWTEDCERSFQELKERLVTAPVLILP 834