BLASTX nr result

ID: Coptis25_contig00043682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043682
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/109 (27%), Positives = 53/109 (48%)
 Frame = +3

Query: 12  METWNVNTRIVSEKRQTCVWERGEAGTFNLNTDGMLQ*QLGGWAAVIRSETGEVVAAAHG 191
           +ETW+     V+   + C W+R + G   LNTDG +  +  G   + R   G  +     
Sbjct: 148 LETWSDLLGPVARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVS 207

Query: 192 KSLFQSIALIELQGLHQGLKMARRRNINRLCAQTDSTNVLSFLKGSHPW 338
           K+    I L+EL  + +GL +A   +I  L  ++DS +V++ +    P+
Sbjct: 208 KASGHDIFLVELWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPY 256


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