BLASTX nr result

ID: Coptis25_contig00043678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043678
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265628.2| PREDICTED: pleiotropic drug resistance prote...   192   3e-54
emb|CBI40241.3| unnamed protein product [Vitis vinifera]              192   3e-54
ref|XP_003633494.1| PREDICTED: pleiotropic drug resistance prote...   192   3e-54
emb|CBI40242.3| unnamed protein product [Vitis vinifera]              192   3e-54
sp|Q2PCF1.1|PDR2_NICPL RecName: Full=Pleiotropic drug resistance...   192   3e-53

>ref|XP_002265628.2| PREDICTED: pleiotropic drug resistance protein 2-like [Vitis
           vinifera]
          Length = 1447

 Score =  192 bits (487), Expect(2) = 3e-54
 Identities = 91/111 (81%), Positives = 102/111 (91%)
 Frame = +2

Query: 2   VLGLMRLSPSRKRINKILRNVSGVLLPSRMTLLLGPPGSGKTTLLQALAGKPDKDLRVTG 181
           +LGL+RLSPS+KR+ KIL++VSG++ PSRMTLLLGPP SGKTTLLQALAGK DKDLR+ G
Sbjct: 169 ILGLIRLSPSKKRVVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKDLRMEG 228

Query: 182 NITYCGHEFHEFVPQRTCAYISQHDLQYGEMTVRETLDFSGRCLGVGTRYD 334
            ITYCGHE  EFVPQRTCAYISQHDL +GEMTVRETLDFSGRCLGVGTRY+
Sbjct: 229 KITYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYE 279



 Score = 45.1 bits (105), Expect(2) = 3e-54
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +1

Query: 334 LMTELSRREKKIGIKPDPDVDAFMK 408
           L+ ELSRREK+ GIKPDP++DAFMK
Sbjct: 280 LLAELSRREKEAGIKPDPEIDAFMK 304


>emb|CBI40241.3| unnamed protein product [Vitis vinifera]
          Length = 1444

 Score =  192 bits (487), Expect(2) = 3e-54
 Identities = 91/111 (81%), Positives = 102/111 (91%)
 Frame = +2

Query: 2   VLGLMRLSPSRKRINKILRNVSGVLLPSRMTLLLGPPGSGKTTLLQALAGKPDKDLRVTG 181
           +LGL+RLSPS+KR+ KIL++VSG++ PSRMTLLLGPP SGKTTLLQALAGK DKDLR+ G
Sbjct: 228 ILGLIRLSPSKKRVVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKDLRMEG 287

Query: 182 NITYCGHEFHEFVPQRTCAYISQHDLQYGEMTVRETLDFSGRCLGVGTRYD 334
            ITYCGHE  EFVPQRTCAYISQHDL +GEMTVRETLDFSGRCLGVGTRY+
Sbjct: 288 KITYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYE 338



 Score = 45.1 bits (105), Expect(2) = 3e-54
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +1

Query: 334 LMTELSRREKKIGIKPDPDVDAFMK 408
           L+ ELSRREK+ GIKPDP++DAFMK
Sbjct: 339 LLAELSRREKEAGIKPDPEIDAFMK 363


>ref|XP_003633494.1| PREDICTED: pleiotropic drug resistance protein 2-like [Vitis
           vinifera]
          Length = 1425

 Score =  192 bits (487), Expect(2) = 3e-54
 Identities = 91/111 (81%), Positives = 102/111 (91%)
 Frame = +2

Query: 2   VLGLMRLSPSRKRINKILRNVSGVLLPSRMTLLLGPPGSGKTTLLQALAGKPDKDLRVTG 181
           +LGL+RLSPS+KR+ KIL++VSG++ PSRMTLLLGPP SGKTTLLQALAGK DKDLR+ G
Sbjct: 147 ILGLIRLSPSKKRVVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKDLRMEG 206

Query: 182 NITYCGHEFHEFVPQRTCAYISQHDLQYGEMTVRETLDFSGRCLGVGTRYD 334
            ITYCGHE  EFVPQRTCAYISQHDL +GEMTVRETLDFSGRCLGVGTRY+
Sbjct: 207 KITYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYE 257



 Score = 45.1 bits (105), Expect(2) = 3e-54
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +1

Query: 334 LMTELSRREKKIGIKPDPDVDAFMK 408
           L+ ELSRREK+ GIKPDP++DAFMK
Sbjct: 258 LLAELSRREKEAGIKPDPEIDAFMK 282


>emb|CBI40242.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  192 bits (487), Expect(2) = 3e-54
 Identities = 91/111 (81%), Positives = 102/111 (91%)
 Frame = +2

Query: 2   VLGLMRLSPSRKRINKILRNVSGVLLPSRMTLLLGPPGSGKTTLLQALAGKPDKDLRVTG 181
           +LGL+RLSPS+KR+ KIL++VSG++ PSRMTLLLGPP SGKTTLLQALAGK DKDLR+ G
Sbjct: 169 ILGLIRLSPSKKRVVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKDLRMEG 228

Query: 182 NITYCGHEFHEFVPQRTCAYISQHDLQYGEMTVRETLDFSGRCLGVGTRYD 334
            ITYCGHE  EFVPQRTCAYISQHDL +GEMTVRETLDFSGRCLGVGTRY+
Sbjct: 229 KITYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYE 279



 Score = 45.1 bits (105), Expect(2) = 3e-54
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +1

Query: 334 LMTELSRREKKIGIKPDPDVDAFMK 408
           L+ ELSRREK+ GIKPDP++DAFMK
Sbjct: 280 LLAELSRREKEAGIKPDPEIDAFMK 304


>sp|Q2PCF1.1|PDR2_NICPL RecName: Full=Pleiotropic drug resistance protein 2; AltName:
           Full=NpPDR2 gi|84871800|emb|CAH40786.1| PDR-like ABC
           transporter [Nicotiana plumbaginifolia]
          Length = 1461

 Score =  192 bits (487), Expect(2) = 3e-53
 Identities = 91/111 (81%), Positives = 101/111 (90%)
 Frame = +2

Query: 2   VLGLMRLSPSRKRINKILRNVSGVLLPSRMTLLLGPPGSGKTTLLQALAGKPDKDLRVTG 181
           VLGL+ LSPS+KR+ KIL +VSG++ PSRMTLLLGPPGSGKTT L+ALAGK +KDLRV G
Sbjct: 171 VLGLIHLSPSKKRVVKILEDVSGIIRPSRMTLLLGPPGSGKTTFLKALAGKSEKDLRVNG 230

Query: 182 NITYCGHEFHEFVPQRTCAYISQHDLQYGEMTVRETLDFSGRCLGVGTRYD 334
            ITYCGHEFHEFVPQRT AYISQHDL +GEMTVRETLDF+GRCLGVGTRYD
Sbjct: 231 KITYCGHEFHEFVPQRTSAYISQHDLHHGEMTVRETLDFAGRCLGVGTRYD 281



 Score = 42.0 bits (97), Expect(2) = 3e-53
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +1

Query: 334 LMTELSRREKKIGIKPDPDVDAFMK 408
           L+ ELSRREK+ GI PDP +DAFMK
Sbjct: 282 LLVELSRREKEAGIMPDPQIDAFMK 306


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