BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043645
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
emb|CBI32034.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago ...   157   8e-37

>ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/111 (65%), Positives = 94/111 (84%)
 Frame = +2

Query: 2   WNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCSKEIYRSLRDIEDRLES 181
           WNDVGL+R+LMSEKG+TKEPGCS+IE+DG VH+F AGDT+HP S+ IY+ + +IE++LES
Sbjct: 457 WNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEEKLES 516

Query: 182 AGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGMPIRIFKN 334
            GY+PD S APMVDE  D K  +L LHSERLAI+FG+LN++  +PIR+FKN
Sbjct: 517 IGYLPDYSGAPMVDEVNDGKLNTLRLHSERLAIAFGILNSKPDVPIRVFKN 567


>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/111 (69%), Positives = 89/111 (80%)
 Frame = +2

Query: 2   WNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCSKEIYRSLRDIEDRLES 181
           WNDVGLVR+LM+  GI KEPGCSLIEVDG  H+F AGDTSHP +KEIY+ L  +E+R++S
Sbjct: 453 WNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVVEERIDS 512

Query: 182 AGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGMPIRIFKN 334
            GY PD SQAPMVDE    K+ SL LHSERLAI+ GLLN + GMPIRIFKN
Sbjct: 513 TGYKPDYSQAPMVDELNTSKRDSLRLHSERLAIALGLLNLKPGMPIRIFKN 563


>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/111 (68%), Positives = 90/111 (81%)
 Frame = +2

Query: 2   WNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCSKEIYRSLRDIEDRLES 181
           WNDVG+VR+LM++KG+ KEPGCS IE+DG  H+F AGDTSHP ++EIY +L  IE+R+E 
Sbjct: 439 WNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVER 498

Query: 182 AGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGMPIRIFKN 334
            GY PD SQAPMVDE  D KQ SL LHSERLAI+FGLL  + GMPIRIFKN
Sbjct: 499 VGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKN 549


>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Vitis vinifera]
          Length = 607

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/111 (68%), Positives = 90/111 (81%)
 Frame = +2

Query: 2   WNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCSKEIYRSLRDIEDRLES 181
           WNDVG+VR+LM++KG+ KEPGCS IE+DG  H+F AGDTSHP ++EIY +L  IE+R+E 
Sbjct: 453 WNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVER 512

Query: 182 AGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGMPIRIFKN 334
            GY PD SQAPMVDE  D KQ SL LHSERLAI+FGLL  + GMPIRIFKN
Sbjct: 513 VGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKN 563


>ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
           gi|355515394|gb|AES97017.1| hypothetical protein
           MTR_5g044260 [Medicago truncatula]
          Length = 565

 Score =  157 bits (397), Expect = 8e-37
 Identities = 67/111 (60%), Positives = 95/111 (85%)
 Frame = +2

Query: 2   WNDVGLVRRLMSEKGITKEPGCSLIEVDGEVHQFLAGDTSHPCSKEIYRSLRDIEDRLES 181
           WNDVGL+R+LM++KG++K+PGCSLIE++G  H+F AGDT+HP SK+IY+ + +I+++LES
Sbjct: 411 WNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLES 470

Query: 182 AGYVPDLSQAPMVDEHGDEKQQSLSLHSERLAISFGLLNARQGMPIRIFKN 334
            GY+PD S AP++DE  + KQ ++ LHSERLAI+FGLLN++  MPIR+FKN
Sbjct: 471 VGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKN 521