BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043611
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85646.1| predicted protein [Hordeum vulgare subsp. vulgar...    77   1e-12
ref|XP_002529868.1| Mitochondrial acidic protein MAM33, mitochon...    75   7e-12
ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795...    73   2e-11
ref|XP_004138451.1| PREDICTED: uncharacterized protein At2g39795...    72   6e-11
ref|XP_002873035.1| mitochondrial glycoprotein family protein [A...    71   1e-10

>dbj|BAJ85646.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326529155|dbj|BAK00971.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 262

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 17/137 (12%)
 Frame = -3

Query: 364 PDGFPFEIIDNPGEQTLVLKRQFSSASDETIQVDV-NNFDGPDDYHE------------- 227
           P+ FPFEIIDNPG+Q++VLKR+F     ETI+  V  NFD  +D +              
Sbjct: 102 PEDFPFEIIDNPGDQSIVLKREFGR---ETIKATVYTNFDTEEDLNNDDSDAENDDDIKP 158

Query: 226 -ICFLVTISKQQGPLLQLHCIGSPYNDIE--IKTLHLKEDSPHSSSNLDACDRQLFSEWE 56
            +  +VT+ K QGP+L+  C    +ND E  I+T+ L     + + N  A +   FS+ +
Sbjct: 159 ALQMVVTVEKPQGPILEFEC---NFNDDELAIETMRLLNRDANLTDN--AYEGPQFSDLD 213

Query: 55  EDLQKAFYEFLDMRDRK 5
           E LQK+F+ +L++R  K
Sbjct: 214 ESLQKSFHRYLEVRGIK 230


>ref|XP_002529868.1| Mitochondrial acidic protein MAM33, mitochondrial precursor,
           putative [Ricinus communis] gi|223530644|gb|EEF32518.1|
           Mitochondrial acidic protein MAM33, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 174

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 18/140 (12%)
 Frame = -3

Query: 370 LVPDGFPFEIIDNPGEQTLVLKRQFSSASDETIQVDVNNFDGPDDYHE------------ 227
           ++PDGFPFEI DNPGE+T++L+R++    DE I+V+V+    PD+  E            
Sbjct: 9   IIPDGFPFEIQDNPGERTILLERKY---QDEIIKVEVDAPSNPDEDVEEDDDDDDRNTEE 65

Query: 226 ------ICFLVTISKQQGPLLQLHCIGSPYNDIEIKTLHLKEDSPHSSSNLDACDRQLFS 65
                 I  +V+ISK  G  L+      P ++I I TL ++  +P SS +  A +   F 
Sbjct: 66  SAVTPSIPLVVSISKGNGQCLEFGITAFP-DEITIDTLSIR--NPDSSEDQLAYEGPDFG 122

Query: 64  EWEEDLQKAFYEFLDMRDRK 5
           + +E+LQKAF+++L++R  K
Sbjct: 123 DLDENLQKAFHKYLEIRGIK 142


>ref|XP_002282374.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial [Vitis
           vinifera] gi|296086172|emb|CBI31613.3| unnamed protein
           product [Vitis vinifera]
          Length = 253

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 15/135 (11%)
 Frame = -3

Query: 364 PDGFPFEIIDNPGEQTLVLKRQFSSASDETIQVDVNNFD-----GPDDYHE--------- 227
           PDGFPFEI DNPG+QT+ L R++     E I+V+V+  D     G DD ++         
Sbjct: 93  PDGFPFEIQDNPGQQTISLAREYQG---EVIKVEVHMPDLVTGEGDDDNNDDDNEKGNQS 149

Query: 226 -ICFLVTISKQQGPLLQLHCIGSPYNDIEIKTLHLKEDSPHSSSNLDACDRQLFSEWEED 50
            I  +V++SK+ GP L+  C     ++I I +L +K  +P  S    A +   F++ +E+
Sbjct: 150 SIPLVVSVSKKNGPFLEFGCTAFA-DEIAIDSLSVK--NPEISEEQIAYEGPDFTDLDEN 206

Query: 49  LQKAFYEFLDMRDRK 5
           LQKAF+++L++R  K
Sbjct: 207 LQKAFHKYLEIRGIK 221


>ref|XP_004138451.1| PREDICTED: uncharacterized protein At2g39795, mitochondrial-like
           [Cucumis sativus] gi|449495281|ref|XP_004159787.1|
           PREDICTED: uncharacterized protein At2g39795,
           mitochondrial-like [Cucumis sativus]
          Length = 253

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 19/140 (13%)
 Frame = -3

Query: 367 VPDGFPFEIIDNPGEQTLVLKRQFSSASDETIQV-----------DVNNFDGPDDYHE-- 227
           VP+GFPFEI D+PG QT+ LKR +    DE I V           D N+ D  DD  +  
Sbjct: 88  VPEGFPFEIQDHPGLQTVTLKRTY---QDEVIVVEVHMPDLVSGQDANDNDEDDDADDDN 144

Query: 226 ------ICFLVTISKQQGPLLQLHCIGSPYNDIEIKTLHLKEDSPHSSSNLDACDRQLFS 65
                 I  +V++SK+ GP L+  C   P ++I I +L +K  +P  S +  A +   F 
Sbjct: 145 KANQSCIPLVVSVSKKTGPSLEFSCSAYP-DEISIDSLIVK--NPEHSDDQIAYEGPDFH 201

Query: 64  EWEEDLQKAFYEFLDMRDRK 5
           + +E+LQKAF+++L++R  K
Sbjct: 202 DLDENLQKAFHKYLEIRGIK 221


>ref|XP_002873035.1| mitochondrial glycoprotein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318872|gb|EFH49294.1| mitochondrial
           glycoprotein family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 264

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 20/140 (14%)
 Frame = -3

Query: 364 PDGFPFEIIDNPGEQTLVLKRQFSSASDETIQVDVN--------------NFDGPDDYHE 227
           P+GFPFEIID PGE+T++L+R+F    DETIQV V+              N +G D+  E
Sbjct: 99  PEGFPFEIIDTPGERTVLLRRKF---EDETIQVVVDSVASYDDEEDEAEPNDEGDDEDQE 155

Query: 226 ------ICFLVTISKQQGPLLQLHCIGSPYNDIEIKTLHLKEDSPHSSSNLDACDRQLFS 65
                 +  +V++ K  G  L+      P ++I I +L +K+  P  S N  A +   F 
Sbjct: 156 SVGKIRVPMVVSVEKGDGVCLEFGVSAYP-DEIVIDSLSIKQ--PQESENELAYEGPDFD 212

Query: 64  EWEEDLQKAFYEFLDMRDRK 5
           + +E+LQKAF+ +L++R  K
Sbjct: 213 DLDENLQKAFHRYLEIRGIK 232