BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043571
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    55   1e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 55.1 bits (131), Expect(2) = 1e-07
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 LKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNARE 28
           L  + EKV W+K IW +  +PKH+ I+W      L T+D+L+   +   S C+ C    E
Sbjct: 135 LNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDE 194

Query: 27  NSHHLFFDC 1
              HLFFDC
Sbjct: 195 TRQHLFFDC 203



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
 Frame = -1

Query: 404 LPEEATVADLIHEGPW--NERITGLPEGELKKSILS----VEIHNHLEEDKIVWNATSS 246
           LP  A+VAD + +G W  N   +  P  +L K+ L     V +    E+D  +W    S
Sbjct: 62  LPRNASVADALRDGVWWINGSRSRNPIIQLLKNCLPLSSVVNLQVDAEDDLFMWKVGGS 120


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -3

Query: 210  EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34
            E+L+  R+ V+W+ ++W +  VP+HS + W +    L+TQD+L +  I   + C  C   
Sbjct: 864  EQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 923

Query: 33   RENSHHLFFDC 1
             E+ +HLFF+C
Sbjct: 924  NEDHNHLFFEC 934


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -3

Query: 210  EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34
            E L+  R+ V+W+ ++W +  VP+HS + W      L+TQD+L +  I   + C  C   
Sbjct: 1204 EHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRN 1263

Query: 33   RENSHHLFFDC 1
             E+ +HLFF+C
Sbjct: 1264 NEDHNHLFFEC 1274


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -3

Query: 210 EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34
           E+L+  R+ V+W+ ++W +  VP+HS + W      L+TQD+L +  I   + C  C   
Sbjct: 331 EQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRN 390

Query: 33  RENSHHLFFDC 1
            E+ +HLFF+C
Sbjct: 391 NEDHNHLFFEC 401


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -3

Query: 210 EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34
           E+L+  R  V+W+ ++W +  VP+HS + W +    L+TQD+L +  I   + C  C   
Sbjct: 149 EQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 208

Query: 33  RENSHHLFFDC 1
            E+ +HLFF+C
Sbjct: 209 NEDHNHLFFEC 219