BLASTX nr result
ID: Coptis25_contig00043571
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00043571 (509 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr... 55 1e-07 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 >ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana] gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana] Length = 209 Score = 55.1 bits (131), Expect(2) = 1e-07 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -3 Query: 204 LKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNARE 28 L + EKV W+K IW + +PKH+ I+W L T+D+L+ + S C+ C E Sbjct: 135 LNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDE 194 Query: 27 NSHHLFFDC 1 HLFFDC Sbjct: 195 TRQHLFFDC 203 Score = 25.4 bits (54), Expect(2) = 1e-07 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Frame = -1 Query: 404 LPEEATVADLIHEGPW--NERITGLPEGELKKSILS----VEIHNHLEEDKIVWNATSS 246 LP A+VAD + +G W N + P +L K+ L V + E+D +W S Sbjct: 62 LPRNASVADALRDGVWWINGSRSRNPIIQLLKNCLPLSSVVNLQVDAEDDLFMWKVGGS 120 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 59.7 bits (143), Expect = 2e-07 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Frame = -3 Query: 210 EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34 E+L+ R+ V+W+ ++W + VP+HS + W + L+TQD+L + I + C C Sbjct: 864 EQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 923 Query: 33 RENSHHLFFDC 1 E+ +HLFF+C Sbjct: 924 NEDHNHLFFEC 934 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 59.3 bits (142), Expect = 3e-07 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = -3 Query: 210 EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34 E L+ R+ V+W+ ++W + VP+HS + W L+TQD+L + I + C C Sbjct: 1204 EHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRN 1263 Query: 33 RENSHHLFFDC 1 E+ +HLFF+C Sbjct: 1264 NEDHNHLFFEC 1274 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 59.3 bits (142), Expect = 3e-07 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = -3 Query: 210 EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34 E+L+ R+ V+W+ ++W + VP+HS + W L+TQD+L + I + C C Sbjct: 331 EQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRN 390 Query: 33 RENSHHLFFDC 1 E+ +HLFF+C Sbjct: 391 NEDHNHLFFEC 401 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 59.3 bits (142), Expect = 3e-07 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = -3 Query: 210 EELKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCRNA 34 E+L+ R V+W+ ++W + VP+HS + W + L+TQD+L + I + C C Sbjct: 149 EQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 208 Query: 33 RENSHHLFFDC 1 E+ +HLFF+C Sbjct: 209 NEDHNHLFFEC 219