BLASTX nr result

ID: Coptis25_contig00043570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043570
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...    97   1e-18
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|NP_194685.1| uncharacterized protein [Arabidopsis thaliana] ...    70   2e-10

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   ACNLLDVVSDSSYDWISCMSLEECDVDQVEEEFESLPSWLKSLNNAPSSVLPWLPITCDE 180
           A NLLD VS+SSY+WIS + L+    ++V EEFE++P WLK        +LPWLPI+ DE
Sbjct: 117 ARNLLDQVSESSYEWISSLGLDSGG-ERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDE 175

Query: 181 LRASKLSSSFVDEKVDENSLMEVEGEGKEMED----KSSSVYIENVPIDDEVQRKATCLK 348
           L +    + FV    D + L+   G+G+E  D    +   V  +N P+D EVQ  A  LK
Sbjct: 176 LNS---GTHFVCCGDDLDELVVDTGDGEERVDVVIEEIEIVQSKNAPLDAEVQNTAAGLK 232

Query: 349 TEVVSFESTSKTIGLA 396
            ++++FES+SKT GLA
Sbjct: 233 AQILTFESSSKTGGLA 248


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   ACNLLDVVSDSSYDWISCMSLEECDVDQVEEEFESLPSWLKSLNNAPSSVLPWLPITCDE 180
           A NLLD VS+SSY+WIS + L+    ++V EEFE++P WLK        +LPWLPI+ DE
Sbjct: 117 ARNLLDQVSESSYEWISSLGLDSGG-ERVNEEFEAMPDWLKDTVGDSDLLLPWLPISPDE 175

Query: 181 LRASKLSSSFVDEKVDENSLMEVEGEGKEMED----KSSSVYIENVPIDDEVQRKATCLK 348
           L +    + FV    D + L+   G+G+E  D    +   V  +N P+D EVQ  A  LK
Sbjct: 176 LNS---GTHFVCCGDDLDELVVDTGDGEERVDVVIEEIEIVQSKNAPLDAEVQNTAAGLK 232

Query: 349 TEVVSFESTSKTIGLA 396
            ++++FES+SKT GLA
Sbjct: 233 AQILTFESSSKTGGLA 248


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 58/137 (42%), Positives = 89/137 (64%), Gaps = 5/137 (3%)
 Frame = +1

Query: 1   ACNLLDVVSDSSYDWISCMSLEECDVDQVEEEFESLPSWLK-SLNNAPSSVLPWLPITCD 177
           A NLLD VSDS+Y WIS +SL+  + ++V+EEF S+P +LK + ++A    LPWLP++ D
Sbjct: 111 ARNLLDKVSDSNYQWISGLSLDSGE-ERVDEEFGSIPDYLKDAASSANELFLPWLPLSHD 169

Query: 178 ELRASKLSSSFVDEKVDENSLMEV-EGEGKEMEDKSSSVYIENV---PIDDEVQRKATCL 345
            L + +L   F   +  E+ L +V EG G   +D +  + I+ V   P+D+E+Q  AT L
Sbjct: 170 TLNSREL---FAGYESPEDFLSQVGEGSGDNSKDVAEEMEIDLVMVAPLDEEIQNMATSL 226

Query: 346 KTEVVSFESTSKTIGLA 396
           K  +++FES+SKT+ LA
Sbjct: 227 KERIMTFESSSKTVELA 243


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   ACNLLDVVSDSSYDWISCMSLEECDVDQVEEEFESLPSWLKSLNNAPSSVLPWLPITCDE 180
           A ++LD +S+S+Y+WIS  SL+  +    + EFESLP WLK   N    VLPWLP+  D+
Sbjct: 118 AHDVLDQISESNYEWISGFSLDSGEERVDDGEFESLPDWLKDTVNT-DLVLPWLPVALDD 176

Query: 181 LRASKLSSSFVDEKVDENSLMEV-EGEGKEMEDKSSSVYIE---NVPIDDEVQRKATCLK 348
           L + +L   F   + + + L +V E  G  +E+    + I+   N P+  E+Q  A  L+
Sbjct: 177 LNSREL---FGTHESEGDPLSQVGECAGDTLEEVMEEMEIDSPPNAPLAPEIQDMAASLR 233

Query: 349 TEVVSFESTSKTIGLA 396
            +VV FES S+T+ LA
Sbjct: 234 IQVVIFESCSRTVELA 249


>ref|NP_194685.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5123550|emb|CAB45316.1| hypothetical protein
           [Arabidopsis thaliana] gi|7269855|emb|CAB79714.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|23297599|gb|AAN12988.1| unknown protein [Arabidopsis
           thaliana] gi|332660245|gb|AEE85645.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 493

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
 Frame = +1

Query: 1   ACNLLDVVSDSSYDWISCMSLEECDVDQVEEEFESLPSWLKSLNNAPSSVLPWLPITCDE 180
           A NLLD +    ++WIS + L+  D D +++ F+S+P WL     +  ++LPWLP++CD+
Sbjct: 120 AHNLLDRIPKPKFEWISNLDLDSADEDSMKQVFDSVPDWLSEKLGSAGTILPWLPVSCDD 179

Query: 181 LRASKLSSSFVDEKVDENSLMEVEGEGKEMEDKSSSV-----YIENVPIDDEVQRKATCL 345
           + +  L        VD  +  E+    ++ME+    V     +   V +       A  L
Sbjct: 180 VDSEML-------VVDSWNGKEITQIKEDMEEDQREVVHNIDHTMTVGLQAHDHEMAVNL 232

Query: 346 KTEVVSFESTSKTIGL 393
           + ++ +FESTS+ + L
Sbjct: 233 RAQISNFESTSEVLTL 248


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