BLASTX nr result

ID: Coptis25_contig00043561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043561
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284035.1| PREDICTED: uncharacterized protein LOC100266...   105   3e-21
emb|CAN61579.1| hypothetical protein VITISV_008032 [Vitis vinifera]   105   3e-21
ref|XP_002302320.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002513982.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_003602848.1| SKIP interacting protein [Medicago truncatul...    81   1e-13

>ref|XP_002284035.1| PREDICTED: uncharacterized protein LOC100266077 [Vitis vinifera]
           gi|302142005|emb|CBI19208.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = -2

Query: 270 DSSPCGATLEEGLLDSVLASMVEKDGLVANARAFLEANKMFESYKKLLNMWDRLRPSSQI 91
           DSS  G  +EE LL+SVLA+++ KDG VA A  FLEAN   E  ++LL MW+ L+PS+Q 
Sbjct: 157 DSSVHGTAVEENLLESVLATLINKDGGVATAHDFLEANSEHELCQELLKMWNHLKPSTQR 216

Query: 90  VVSLVAEVKTLQNEKEHLKINLTKAEEEV 4
           V+SL AEVKTL+NE+EHLK+NL +AEEEV
Sbjct: 217 VLSLAAEVKTLENEREHLKLNLHRAEEEV 245


>emb|CAN61579.1| hypothetical protein VITISV_008032 [Vitis vinifera]
          Length = 331

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = -2

Query: 270 DSSPCGATLEEGLLDSVLASMVEKDGLVANARAFLEANKMFESYKKLLNMWDRLRPSSQI 91
           DSS  G  +EE LL+SVLA+++ KDG VA A  FLEAN   E  ++LL MW+ L+PS+Q 
Sbjct: 157 DSSVHGTAVEENLLESVLATLINKDGGVATAHDFLEANSEHELCQELLKMWNHLKPSTQR 216

Query: 90  VVSLVAEVKTLQNEKEHLKINLTKAEEEV 4
           V+SL AEVKTL+NE+EHLK+NL +AEEEV
Sbjct: 217 VLSLAAEVKTLENEREHLKLNLHRAEEEV 245


>ref|XP_002302320.1| predicted protein [Populus trichocarpa] gi|222844046|gb|EEE81593.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/89 (55%), Positives = 67/89 (75%)
 Frame = -2

Query: 270 DSSPCGATLEEGLLDSVLASMVEKDGLVANARAFLEANKMFESYKKLLNMWDRLRPSSQI 91
           DSS     +EE  L+S+LA+MV KD  V + +A+LEAN  +ES + LL MW+ LRPS++ 
Sbjct: 164 DSSAESTDMEENSLESILATMVGKDE-VESGQAYLEANSGYESCQNLLKMWNSLRPSTRK 222

Query: 90  VVSLVAEVKTLQNEKEHLKINLTKAEEEV 4
           V+SL A+ +TLQ +KEHL+INLT+AEEEV
Sbjct: 223 VLSLAAKARTLQQDKEHLRINLTRAEEEV 251


>ref|XP_002513982.1| conserved hypothetical protein [Ricinus communis]
           gi|223547068|gb|EEF48565.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 330

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/88 (53%), Positives = 66/88 (75%)
 Frame = -2

Query: 267 SSPCGATLEEGLLDSVLASMVEKDGLVANARAFLEANKMFESYKKLLNMWDRLRPSSQIV 88
           SS     +E+ LL+S+L+++V +D  +    AFLEA+   ES +KLL MW+ LRPS+Q V
Sbjct: 158 SSSESTDMEQDLLESILSTLVSEDE-IKYGHAFLEASSANESCQKLLRMWNSLRPSTQRV 216

Query: 87  VSLVAEVKTLQNEKEHLKINLTKAEEEV 4
           ++LVA+V+ LQ +KEHL+INLTKAEEEV
Sbjct: 217 LTLVAKVRALQKDKEHLRINLTKAEEEV 244


>ref|XP_003602848.1| SKIP interacting protein [Medicago truncatula]
           gi|355491896|gb|AES73099.1| SKIP interacting protein
           [Medicago truncatula]
          Length = 347

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/80 (55%), Positives = 60/80 (75%)
 Frame = -2

Query: 243 EEGLLDSVLASMVEKDGLVANARAFLEANKMFESYKKLLNMWDRLRPSSQIVVSLVAEVK 64
           E+ LLDS+LA++  KD    +  AFLE+N   ES K+LL+MW+ L PS   V+SLVA++K
Sbjct: 150 EKNLLDSLLATLTNKDD--DSTYAFLESNIENESCKRLLSMWNCLEPSVHRVLSLVAKIK 207

Query: 63  TLQNEKEHLKINLTKAEEEV 4
           +L+ +KEHL+INL KAEEEV
Sbjct: 208 SLEKDKEHLRINLHKAEEEV 227


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