BLASTX nr result

ID: Coptis25_contig00043545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00043545
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41563.3| OSJNBa0006A01.18 [Oryza sativa Japonica Group]         62   4e-08
gb|AAP06924.1| hypothetical protein [Oryza sativa Japonica Group...    62   4e-08
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    61   8e-08
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    61   8e-08
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    60   1e-07

>emb|CAD41563.3| OSJNBa0006A01.18 [Oryza sativa Japonica Group]
          Length = 1189

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1    ETETVRHLFFDCNYSKFIWQYVLKFAGYQRARAASWKLEIA---WVQQVAKGKGYKQDAV 171
            +TET  HL   C Y+K IW+ V  +AGYQ+   A W+   +   W + +A   G  +  +
Sbjct: 1073 DTETAFHLVAMCRYTKRIWRLVATWAGYQQLEPAQWEEARSVHQWWESLANTPGIPKKGL 1132

Query: 172  RLLFTGFIYKVWQERNQRIFSKKK 243
            R L    ++++W+ERN+RIF  K+
Sbjct: 1133 RSLILLVVWEIWKERNRRIFDHKE 1156


>gb|AAP06924.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|108707403|gb|ABF95198.1| transposon protein, putative,
            unclassified [Oryza sativa Japonica Group]
          Length = 1143

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1    ETETVRHLFFDCNYSKFIWQYVLKFAGYQRARAASWKLEIA---WVQQVAKGKGYKQDAV 171
            +TET  HL   C Y+K IW+ V  +AGYQ+   A W+   +   W + +A   G  +  +
Sbjct: 1027 DTETALHLVAMCRYTKRIWRLVATWAGYQQFEPAQWEEARSVHQWWESLANTPGIPKKGL 1086

Query: 172  RLLFTGFIYKVWQERNQRIFSKKK 243
            R L    ++++W+ERN+RIF  K+
Sbjct: 1087 RSLILLVVWEIWKERNRRIFDHKE 1110


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 7    ETVRHLFFDCNYSKFIWQYVLKFAGYQRARAASWKLEIAWVQQVAKGKGYKQDAVRLLFT 186
            E++ HLFF+C+ ++ IW  +L + G +R     W +E+AW+ +  KGKG+K   +++   
Sbjct: 1332 ESINHLFFNCSGTREIWGNILDWLG-RRHDPREWDMELAWIIENTKGKGWKSALLKMATA 1390

Query: 187  GFIYKVWQERNQRIF 231
              +Y VW  RN   F
Sbjct: 1391 ETVYNVWHYRNSMCF 1405


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +1

Query: 7    ETVRHLFFDCNYSKFIWQYVLKFAGYQRARAASWKLEIAWVQQVAKGKGYKQDAVRLLFT 186
            E++ HLFF+C+ ++ IW  +L + G +R     W +E+AW+ +  KGKG+K   +++   
Sbjct: 1215 ESINHLFFNCSGTREIWGNILDWLG-RRHDPREWDMELAWIIENTKGKGWKSALLKMATA 1273

Query: 187  GFIYKVWQERNQRIF 231
              +Y VW  RN   F
Sbjct: 1274 ETVYNVWHYRNSMCF 1288


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = +1

Query: 1   ETETVRHLFFDCNYSKFIWQYVLKFAGYQRARAASWKLEIAWVQQVAKGKGYKQDAVRLL 180
           E ETV+HL F+C     IW+ VL +        A W  E+ W++  +KGK +K   ++  
Sbjct: 298 EVETVQHLLFECGEMYAIWKKVLDWLNVDH-EPAGWLQELDWIEDTSKGKNWKSRFLKTS 356

Query: 181 FTGFIYKVWQERNQRIFSK 237
           F   +Y+ W+ RN +I  K
Sbjct: 357 FVETVYRCWKYRNNKIHEK 375


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